Detailed information of evm.model.HiC_scaffold_2.71 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:1170381...1175006
NR annotation: XP_028789041.1, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2-like [Prosopis alba]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F6HDT7Acireductone dioxygenase 2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g04080 PE=3 SV=1
A2XCT8Acireductone dioxygenase 2 OS=Oryza sativa subsp. indica OX=39946 GN=ARD2 PE=2 SV=2
Q10RE5Acireductone dioxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARD2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009488 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03079
all species →		ARDARD/ARD' familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027496
all species →		FamilyAcireductone dioxygenase, eukaryotesInterproscan
IPR004313
all species →		FamilyAcireductone dioxygenase ARD familyInterproscan
IPR011051
all species →		Homologous_superfamilyRmlC-like cupin domain superfamilyInterproscan
IPR014710
all species →		Homologous_superfamilyRmlC-like jelly roll foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23418
all species →		ACIREDUCTONE DIOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0019509
all species →		Biological ProcessL-methionine salvage from methylthioadenosineInterproscan
GO:0010309
all species →		Molecular Functionacireductone dioxygenase [iron(II)-requiring] activityInterproscan
GO:0006555
all species →		Biological Processmethionine metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08967mtnD, mtnZ, ADI1; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenaseEC:1.13.11.53
EC:1.13.11.54
Cysteine and methionine metabolismko00270deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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