Detailed information of evm.model.HiC_scaffold_20.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_20:1214...1760
NR annotation: XP_033624179.1, protein LMBR1L-like [Asterias rubens]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q803C7Limb region 1 homolog-like protein OS=Danio rerio OX=7955 GN=lmbr1l PE=2 SV=1
Q9D1E5Protein LMBR1L OS=Mus musculus OX=10090 GN=Lmbr1l PE=1 SV=1
Q4R7X9Protein LMBR1L OS=Macaca fascicularis OX=9541 GN=LMBR1L PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006399 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for evm.model.HiC_scaffold_20.1 in Chrysaora quinquecirrha.
 InterPro
InterPro termTypeDescriptionSource
IPR008075
all species →		FamilyLipocalin-interacting membrane receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12625
all species →		LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR LIMRInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004888
all species →		Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_20.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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