Detailed information of evm.model.HiC_scaffold_20.6 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_20:54638...69288
NR annotation: XP_052091826.1, uncharacterized protein LOC127728471 [Mytilus californianus]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O81884L-galactose dehydrogenase OS=Arabidopsis thaliana OX=3702 GN=LGALDH PE=1 SV=1
Q52472D-threo-aldose 1-dehydrogenase OS=Pseudomonas sp. OX=306 GN=fdh PE=1 SV=1
P777351-deoxyxylulose-5-phosphate synthase YajO OS=Escherichia coli (strain K12) OX=83333 GN=yajO PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004253 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00248
all species →
Aldo_ket_redAldo/keto reductase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044479
all species →
FamilyL-galactose dehydrogenase-likeInterproscan
IPR023210
all species →
DomainNADP-dependent oxidoreductase domainInterproscan
IPR036812
all species →
Homologous_superfamilyNADP-dependent oxidoreductase domain superfamilyInterproscan
IPR020471
all species →
FamilyAldo-keto reductaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42686
all species →
GH17980P-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0010349
all species →
Molecular FunctionL-galactose dehydrogenase activityInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_20.6.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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