Detailed information of evm.model.HiC_scaffold_20.65 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_20:762295...777731
NR annotation: KXJ18673.1, Vacuolar protein sorting-associated protein 13B [Exaiptasia diaphana]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z7G8Intermembrane lipid transfer protein VPS13B OS=Homo sapiens OX=9606 GN=VPS13B PE=1 SV=2
Q80TY5Intermembrane lipid transfer protein VPS13B OS=Mus musculus OX=10090 GN=Vps13b PE=1 SV=3
Q54KX3Intermembrane lipid transfer protein vps13F OS=Dictyostelium discoideum OX=44689 GN=vps13F PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003058 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12624
all species →		Chorein_NVPS13-like, N-terminalDomainInterproscan
PF16908
all species →		VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026854
all species →		DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR031646
all species →		DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan
IPR039782
all species →		FamilyIntermembrane lipid transfer protein VPS13BInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12517
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13BInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.HiC_scaffold_20.65. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_20.65.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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