Detailed information of evm.model.HiC_scaffold_21.2 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_21:5987...11435
NR annotation: CAH3106979.1, unnamed protein product [Pocillopora meandrina]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Z2Z7CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial OS=Cricetulus griseus OX=10029 GN=PGS1 PE=1 SV=1
Q8BHF7CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Pgs1 PE=1 SV=1
Q5ZHN9CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial OS=Gallus gallus OX=9031 GN=PGS1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005797 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13091
all species →		PLDc_2PLD-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016270
all species →		FamilyCDP-alcohol phosphatidyltransferase class-II familyInterproscan
IPR025202
all species →		DomainPhospholipase D-like domainInterproscan
IPR001736
all species →		DomainPhospholipase D/TransphosphatidylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12586
all species →		CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0008444
all species →		Molecular FunctionCDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activityInterproscan
GO:0032049
all species →		Biological Processcardiolipin biosynthetic processInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00995pgsA, PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferaseEC:2.7.8.5
Glycerophospholipid metabolismko00564deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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