Detailed information of evm.model.HiC_scaffold_213.2 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_213:10654...14636
NR annotation: XP_002154007.1, endochitinase 4 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q41596Endochitinase 1 OS=Theobroma cacao OX=3641 GN=CHIA1 PE=2 SV=1
P51613Basic endochitinase OS=Vitis vinifera OX=29760 GN=CHIT1B PE=2 SV=1
Q39785Endochitinase 2 (Fragment) OS=Gossypium hirsutum OX=3635 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012955 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00182
all species →		Glyco_hydro_19Chitinase class IDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000726
all species →		DomainGlycoside hydrolase, family 19, catalyticInterproscan
IPR023346
all species →		Homologous_superfamilyLysozyme-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47836
all species →		PROTEIN CBG09520-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004568
all species →		Molecular Functionchitinase activityInterproscan
GO:0006032
all species →		Biological Processchitin catabolic processInterproscan
GO:0016998
all species →		Biological Processcell wall macromolecule catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_213.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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