Detailed information of evm.model.HiC_scaffold_216.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_216:5045...28900
NR annotation: XP_047128491.1, protein GDAP2 homolog [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7T167Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1
Q2KIX2Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus OX=9913 GN=GDAP2 PE=2 SV=1
Q9DBL2Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus OX=10090 GN=Gdap2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001271 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13716
all species →		CRAL_TRIO_2Divergent CRAL/TRIO domainDomainInterproscan
PF01661
all species →		MacroMacro domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002589
all species →		DomainMacro domainInterproscan
IPR036865
all species →		Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR001251
all species →		DomainCRAL-TRIO lipid binding domainInterproscan
IPR043472
all species →		Homologous_superfamilyMacro domain-likeInterproscan
IPR035793
all species →		DomainGDAP2, macro domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11106
all species →		GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.HiC_scaffold_216.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_216.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP