Detailed information of evm.model.HiC_scaffold_216.2 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_216:39932...43977
NR annotation: XP_004210423.1, terminal nucleotidyltransferase 5C [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96IP4Terminal nucleotidyltransferase 5A OS=Homo sapiens OX=9606 GN=TENT5A PE=1 SV=2
D3Z5S8Terminal nucleotidyltransferase 5A OS=Mus musculus OX=10090 GN=Tent5a PE=1 SV=2
F7E7M3Terminal nucleotidyltransferase 5B OS=Xenopus tropicalis OX=8364 GN=tent5b PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009157 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07984
all species →		NTP_transf_7Nucleotidyltransferase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012937
all species →		FamilyTerminal nucleotidyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12974
all species →		PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:1990817
all species →		Molecular Functionpoly(A) RNA polymerase activityInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0048255
all species →		Biological ProcessmRNA stabilizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_216.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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