Gene detail

Detailed information of evm.model.HiC_scaffold_22.2 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_22:29921...43310
NR annotation: XP_002156389.2, eIF5-mimic protein 2 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZLT7	eIF5-mimic protein 2 OS=Gallus gallus OX=9031 GN=BZW1 PE=2 SV=1
Q7L1Q6	eIF5-mimic protein 2 OS=Homo sapiens OX=9606 GN=BZW1 PE=1 SV=1
Q9CQC6	eIF5-mimic protein 2 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006425 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02020 all species →	W2	eIF4-gamma/eIF5/eIF2-epsilon	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003307 all species →	Domain	W2 domain	Interproscan
IPR051245 all species →	Family	eIF5-mimic translation initiation regulator	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR043510 all species →	Domain	BZW1/2, W2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14208 all species →	BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15030	EIF3M; translation initiation factor 3 subunit M	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.