Detailed information of evm.model.HiC_scaffold_22.201 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_22:2728393...2731840
NR annotation: CAH3036056.1, unnamed protein product [Pocillopora meandrina]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5THJ4Intermembrane lipid transfer protein VPS13D OS=Homo sapiens OX=9606 GN=VPS13D PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001911 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06650
all species →		VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009543
all species →		DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR026847
all species →		FamilyVacuolar protein sorting-associated protein 13Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006623
all species →		Biological Processprotein targeting to vacuoleInterproscan
GO:0007005
all species →		Biological Processmitochondrion organizationInterproscan
GO:0019898
all species →		Cellular Componentextrinsic component of membraneInterproscan
GO:0045053
all species →		Biological Processprotein retention in Golgi apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_22.201.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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