Detailed information of evm.model.HiC_scaffold_22.255 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_22:3333921...3362533
NR annotation: XP_028405133.1, vitamin K-dependent gamma-carboxylase-like [Dendronephthya gigantea]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9GL59Vitamin K-dependent gamma-carboxylase OS=Ovis aries OX=9940 GN=GGCX PE=2 SV=1
Q07175Vitamin K-dependent gamma-carboxylase OS=Bos taurus OX=9913 GN=GGCX PE=1 SV=1
O88496Vitamin K-dependent gamma-carboxylase OS=Rattus norvegicus OX=10116 GN=Ggcx PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003929 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05090
all species →		VKG_CarboxVitamin K-dependent gamma-carboxylaseFamilyInterproscan
PF14580
all species →		LRR_9Leucine-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR007782
all species →		FamilyVitamin K-dependent gamma-carboxylaseInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR011020
all species →		DomainHTTMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12639
all species →		VITAMIN K-DEPENDENT GAMMA-CARBOXYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0008488
all species →		Molecular Functiongamma-glutamyl carboxylase activityInterproscan
GO:0017187
all species →		Biological Processpeptidyl-glutamic acid carboxylationInterproscan
GO:0019842
all species →		Molecular Functionvitamin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_22.255.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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