Detailed information of evm.model.HiC_scaffold_22.341 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_22:4834311...4841255
NR annotation: CAB4017560.1, Hypothetical predicted protein [Paramuricea clavata]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000032 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271
all species →		Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF09382
all species →		RQCRQC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650
all species →		DomainHelicase, C-terminal domain-likeInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR018982
all species →		DomainRQC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47018
all species →		CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0043138
all species →		Molecular Function3'-5' DNA helicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_22.341.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP