Detailed information of evm.model.HiC_scaffold_23.198 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:2466727...2515393
NR annotation: XP_012555760.1, brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y6D6Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens OX=9606 GN=ARFGEF1 PE=1 SV=2
G3X9K3Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus OX=10090 GN=Arfgef1 PE=1 SV=1
O46382Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Bos taurus OX=9913 GN=ARFGEF1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002842 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09324
all species →		Sec7-like_HDSMon2/Sec7/BIG1-like, HDSDomainInterproscan
PF20252
all species →		BIG2_CBIG2 C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR015403
all species →		DomainMon2/Sec7/BIG1-like, HDSInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR046455
all species →		DomainSec7/BIG1-like, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10663
all species →		GUANYL-NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.HiC_scaffold_23.198. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_23.198.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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