Detailed information of evm.model.HiC_scaffold_23.333 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:4154310...4161911
NR annotation: EDO39323.1, predicted protein [Nematostella vectensis]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O70338Ribonuclease H1 OS=Mus musculus OX=10090 GN=Rnaseh1 PE=2 SV=1
Q5BK46Ribonuclease H1 OS=Rattus norvegicus OX=10116 GN=Rnaseh1 PE=2 SV=1
O60930Ribonuclease H1 OS=Homo sapiens OX=9606 GN=RNASEH1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004905 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00075
all species →		RNase_HRNase HDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002156
all species →		DomainRibonuclease H domainInterproscan
IPR050092
all species →		FamilyRibonuclease HInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10642
all species →		RIBONUCLEASE H1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0004523
all species →		Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0043137
all species →		Biological ProcessDNA replication, removal of RNA primerInterproscan
GO:0090502
all species →		Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_23.333.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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