Gene detail

Detailed information of evm.model.HiC_scaffold_23.397 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:5133530...5259313
NR annotation: XP_001636251.2, antizyme inhibitor 2 [Nematostella vectensis]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.HiC_scaffold_23.397

ATGAATTATCGATGGTTGGTTGTCCTGGTTTCTGTGGCCTTGTTCGCTGCCATCTCTGGAGTGAGATGTGCCAGCCTTGCAAAAGATGCCAACTGGATAAGCTCTCTTGAGTCCGACAAGTTGGATGATGCTGAAATCGAATCTCTTTCTTTTGATGATGAACATACAGGCCAAGAAGGCTCCCTGCAAAACTCTGCTACAATCAAGGATCCAACATCTGATGATTTGGAGAAGGAGCTCGATGATATCAGCAAGGAAAATGCTAAAAAAGATTTTGATGAGCAGCTTAGTAAGAGAGAAGaGGGTTCCCTTTGGACTTATTCCAAAATTTATGACCCAAAATCAGAACGTGAAGATCCGTCCTCTGGCTCGTCTCAGggtaacaacaataacaaccaGAAATCAATTGAGGAAATCAACGAAGaacaaaaagaaaatattcctgTGAAAATCATAGACGGCGATATAGCAGTCGATCCTGACGCACCAGCCAATGATTATGAGAAAAGAAGCTCTACATCAGACATGCATTATTTGTGGTTAGACAGAGTTATTCCATACACATTTGATAGTTCTTTGAGTGATAGTGCAAAGATAGCTATAAGAAACGCCATGGCCCACTATGAAAATAAAACGTGCTTGAGGTTTACTGATGACATAACGAATAGGACAAATTGGCTTAATTTCTTTAAAGCAGGAGGtTGTTGGTCATACGTTGGTCGCCTATATTATCGATATGGCCGTCAAAATGTCTCCATTGGAAGTGGGTGTGAAAGTCTTGGAACGATATTACATGAGATAATGCATGCGATTGGTTTTAATCATGAACAAGCAAGATACGACCGAGACCTGTATGTCGAAGTACTTTGGGAAAACATTAAAGCAGAAGCCTTGAATCCTTGCATCCCATTCTGGATCCCCTTTACCTACTCAAGAAAGTTGCAAATTAGTGCAGATACGCTACCCGTTTACATGGGACCTTGGAGATCCACATTGTTTGTATTTGCTGTGCGTACTGGTTTAGGAAGTTTCAAACTGGAACTGTTCTCATCTCTTTCAACTGAACCTAAGCCACGGAATCGTTACAAATGGAGCACTTTTCGAAGATTTCCCGAACTAGAACGAACAGAAGATCCGGACAAGTCTTTATCCAGCAAGTCCTGTGTAAACGGTAGTCTAATCTGTACTTGCAAAGAAGGCAATTTCCGGAAAAAAGGACGTGCATACTCTCAACTGTTCGGAACTAACTACGATTACAAGGGAATCATGCATTATGGGAGAACATATTTCACGAAGAATGGCAGACCAACGCTTCTGTCGCTTAGAAATCCCAACGAACAGCTTGGGCAAAGAAATGATTTCACTGCGGACGATTTAACAGAAATCAATGAACTCTATCAATGCAAAAAAACGACAGGAGGTTTCACCGAGTGGTCCTCTTGGGGGCCATGTGTGGTAGATACAGGCACTGGTGCCTATGTGAAATACCGCCAGAGATACTGTTACGAGAAAGACGTGTCCAAATGTACCAAGCCAGCAAACGCAGTTGTTTCTCAATATGGAATCGTAACAGAATGGAAATGGACGGTCACTGGGGTAAATGGTCAAATTGGGGTTCTCATGAAGGAACGTGCGGATATGCCACGCGAAACAGAACAAGAGAATGCAACGATCCTAAACCAAGATGTAATGGAGCTCCATGTAATGGTAGTTCGACCGAAGACGGGAAAATCTATCTGGGAAGCTGTAGTCTGGACCGTTGTTAATTTTTCAGGCCCATATGACTGTGAATTTGAAAGTTCATCAAAGCCGCTTTGCCACTGGCAGAACTTGAACGCCAATGCCCCATTCTTGTTGGGTTCTGGGGAACGCCGAGTTCTGGTACTGGGCCAACTGGTGATGCAACCAATGGAGgccaaaattgccagcattttggcagattttatGGATGTCGCCCTTGACGAAATTATGTTTACATTTGCAGTCGATAACTGCAATCCTAACCCATGCCAAAATTTTGGATCGTGCACTAATTCAAATGGAGGCTACAAGTGTTCATGCGCAGTCGATTACACTGGAGTAAATTGTGAGACAAAAATCGATTACTGCAATCCTAACCCATGCAAGAACGGTGGATCGTGTACCAGTTCAAATGGAGTTTACACATGTTTGTGTCTTCCCGGTTACACTGGACAGAACTGTGATACAAATATCGATTACTGCAATCCAAACCCATGCAAGAATTCTGGATCGTGCACTAATTCAAATGGAGGCTACAAGTGTTCATGCGCAGTCGATTACACTGGAGTAAATTGTGAGACAAAAATCGATTACTGCAATCCTAACCCATGCAAGAATTCTGGATCGTGCACTAATTCAAATGGAGGCTACAAGTGTTCATGCGCAGTCGATTACACTGGAGTAAATTGTGAGACAAAAATCGATTACTGCAATCCTAACCCATGCAAGAACGGTGGATCGTGTACCAGTTCAAATGGAGTTTACACATGTTTGTGTCTTCCCGGTTACACTGGACAGAACTGTGATACAAATATCGATTACTGCAATCCAAACCCATGCAAGAATTCTGGATCGTGCACTAATTCAAATGGAGGCTACAAGTGTTCATGCGCAGTCGATTACACTGGAGTAAATTGTGAGACAAAAATCGATTACTGCAATCCTAACCCATGCAAGAATTCTGGATCGTGCACTAATTCAAATGGAGGCTACAAGTGTTCATGCGCAGTCGATTACACTGGAGTAAATTGTGAGACAAAAATCGATTACTGCAATCCTAACCCATGCAAAAATTCTGGATCGTGCACTAATTCAAATGGAGGCTACAAGTGTTCATGCGCAGTCGATTACACTGGAGTAAATTGTGAGACAAGAATTGATCGATGCCAGCCAAACCCCTGCCAGAACGCTGGAACATGTTACAACACCAATGGGGACTATGGTTGTGTATGTATTGGAGATTTTACCGGCAAAAACTGTGAAACAAaGATAAATTACTGCACTCCGAACCCCTGCCAAAATAATGGCTCATGCAGCAGTGTTGGTGGAGGTTACAAATGTTGGTGTCTACCTGGTTACACTGGATTGAACTGTGAAACAcAAGTCAATTACTGCAATCCTAACCCATGCAAGAACGGTGGATCATGTGTTAATAATAACGGAGGCTACACGTGTCTGTGTCCGACTGGTTACACTGGATTGAATTGCGAAACAAATCTCGATCACTGCAGTCCGAATCCCTGCCGAAATGCTGGATCATGCCTCAATGTTAATGGAGGTTATAAATGCTTGTGTCGTCCTGGTTACACTGGATTGAATTGCGACATACATATGGGTTATTGCAATCCAAACCCATGCCAAAATGGTGGATCATGTACTAATACAAATGGAGGTCACCTTTGTTCCTGCACACCAGATTACACTGGATTAAATTGTGAAACAAAGTTTGATTACTGCATTCCTAACCCATGCAAGAACGGTGGATCTTGCAATAATTATACTGGAGGTTACTGGTGTCAGTGTCCGAATGGTTATACGGGATCGAACTGTGAAATACAAATCAATTACTGCAATCCTAACCCATGCAAGAACGGTGGATCATGCGTTAATAATAATGGAGGTTACATGTGTCTGTGTCCGGCTGGTTACACTGGATTGAATTGCGAAACAAATGTCGATCACTGCAATCCTAACCCATGCAAGAATAATGGATCATGCAATAATTATAATGGAGGTTACTGGTGTCAGTGTCCGAATGGTTATACGGGATCGAACTGTGAAATACAAATCAATTACTGCAATCCTAACCCATGCAAGAACGGTGGATCATGCGTTAATAATAATGGAGGTTACATGTGTCTGTGTCCGGCTGGTTACACTGGATTGCACTGTGAAACAAAAAGCGGTGGATGCATCCCGAACCCCTGTAGAAATGGCGGCACATTCATTGACAACAACGAAACGACAACATACACATGCACATGTCTTTATGGATATACTGGAGCTAAATGTGAAGCAAATATAGATGAATGTGCATCTgatccttgtcaaaatggtggaACATGTATTGATGGAGTCGGTGGACATTCTTGTACATGTGCTGTCGGATACACGGGATCAAACTGCGAAGAAAatataaatgaatgtgAACCTAATCCTTGTCAATATGGCGGTGTGTGTCACGATGGAGTAGATGGACATTCCTGTACATGTGAAACGGGATTCACAGGGACAAACTGTGAAACAAGTCTCGAAAATGATGCTTGTGCTTCGAATCCATGCTTAAATAATAGAACATGTATTAATGATCATGGAAACTACACATGTCAGTGTCCATTTGGTTATAGTGGAGTGCATTGCGAAACAGatataaatgaatgtgCATCtaatccttgtcaaaatggtggaACATGTAATGATGGGGTCGGTGGATATTCTTGTACATGTGCTGTCGGATACACGGGATCAAACTGCGAAGAGAaaactaatatctgtaattatgcagacgataccaccatttatgcaagcgataagaatttggataacgtaatcatgagattagagaatgattccacgatatttattcaatggtttgaagataactttatgaaattaaatacagaaaaatgtcactttATGGTACTAGGGAAAAGCGCTAATCAAACTATTACAGTTAGTGTAGGTGAcagcattattgaaaataaggacgaggagaagttgctcggagtaataatcgatcacaaactaacttatgAGACGCATATTAATAAGCTATGGTATGGACACTACATGTACATTCAAACTAAAGCGGGTGAACCAGGTGCAAAGGCTGTCATTAATATTCGATTGCCCGCGTCAGTTGTTTTGACAGAATACTGTCTTGACTTCTGGTACGAAACGCGTAACATTCACCATGATATTTTGACTGTTACGTCCGAAGATAACGCAGGTGATAGCACAGAATTGTTAAGAAAAACTGGTCCACATGGTGACAACTggttaaataaaaagataacttTCCCCGCATCTTcagttaaggggcaattcactctttttGAATCTCGTACACCGTACACGCTCGGCCTGAATCTCTTTGTTTCAGCTGTCATCtggtacgctttttcgaggagtgaaatgcgcCTCGGTATCCAACTCAAGCGAAAAAACCACCAAAGTAGTGCATATCCCAGCGTATCCACCTcTCTTGCAGCACCGAAGGAAATCGGATTCTGTTTgcttgagttttcaaaactctttTTTGTTGCTTTAAAAGGCATCACCATTTCGGCGAAGCCGTTAAACGAAAGAGGGCGGGACACATTGAGTGGTCTTggCCTGTCCCCCGCAGGCCGCTTAATCATTCGAAGCTTTGAAGTTCCCTGGAGTGGTCTTGACGAAGCTGTGAAATGTAACAATGAACCTGCAGTCTTGGAAATACTCAGCAATCTTGGCTTGGGTTTTGACTGTGCAAGTAAACATGAAATACAAAGTGTTTTGAACATGGGTGTGTCACCTGATCGCATTATCTTTGCCAATCCTTGCAAGCAAGCATCTCACTTAAGATACGCTGCTGCCAATGATGTTGCTTTGATGACATTTGACAACGAAGCAGAGCTGCATAAAACCAAAGATTTGTACCCTAATGCCAAACTGGTCATCAGAATTCGTGTTGACGATTCCAAATCTCTTTGCCAGCTCGGTGTGAAGTATGGCGTACCGCAAGGAAAGACCAAAGGCCTTTTGGAAACTGCCAAACGTCTTGGTCTAAATGTCGTTGGTGTGAGCTTTCACGTTGGTAGTGGTTGCTTTGATGCCTCAGCATTTTACTATGCTGTTAAAGCTGCTAAGCAAGTATTCAATGAAGCTGAATCACTTGGCTTTGATTTCACTCTGCTTGACATTGGAGGAGGATTCCCAGGAGATAACAAGGCAGAAATATCATTTGAAGAGACTGCCGACCAGCTGAATCGTGCATTTGCCAAATACTTTCCAGTTGGCTGTGGCGTGAAAATCATTGCTGAACCTGGACGATTCTTTGTCTCATCTGCTTTCACCATCGCTTGTAACATCACCTCCGTCAGATCCGTCCATGGTGATTTTTCAGAGAAGAAGAACCGAAAGGAGATGGAGATTGGAGATTGGATTTATTTTGAGAATATGGGTGCTTATACAATGGCTGCCGCTTCAACATTCAATGGTTTCATGAAGCCACGTATTCATTATTACATTGCTGAATCACAATACAATTCAGTGCGTCATCTGTTTCAGCCAGTCATGGAGCGTAAACAAACGCTCTCTGATTGCTACATCTTTGATGAAAGACGGGGGAGCTTTCACATACACTATCAGAGGAGTGTCTGGAACCAAGCTGATGGACAGCTCAATCGAAAGGGGGCGCTTACTCGAGGAAGTAAGTATCAGCACTGCTCTAGCATCGGAAGCTActtggcaaatttacaaaacaTTAACTGCCCGACTTTGCCGATTGGTGTCAAATCATGGCATTATTTCGATGCTGCAGAAGATTCACAAGCAGACCGAAGGTGGTGTACTGTATGGAGTCAGAGTCTAACCCAGCAAACTCGGGGCGCGAGGAGGTCAATCTGTGAAGTTTGGAGTTTGAAAGAAAGATTCGTCTTTGGAGCTTATCGTGGATTTAAGAACAACACCACAACTGCATATAAATTGATGAATACAGCAACTGTATCAGTTTTCAGAGTCAGCATCAGCAAGCGAGAAAAGAAGGATGAGGATAATTTCCGGAAAACCACGGGTGTTTTATCTCCTACCACCTCCCCCCTGTTTTTGAAGCATCTGTGGACAATCGACAAGTGCTTGCCAGACAAGTCGAGATTAGATTCGAAATCGAACGCAGATTATCAAATGACTGAACACTGTGGAATGGTCATGGAGAGGAAACCAGTTAAAGTTGACAGACAGAAACGTTTAACGAGAGGAAACTCGCACTATGAGTTCTTATTAAGTGGTTTCCAGTTAAAAGAGTCTACAGCATTCAGACAGAATAACGCACACCCTCCCGTTCCTGTTAGGAGTTTCATAGTTCCTGAACGAATATGCCACAAGGTTGAATTTAAAAATATACGAAATCCAGTCCTTCATTCAGCCAGAATGTCTGTGGAGGAGAGTCTTCAATATCTCGACAATACCCTTGCCGAACTCGATAAAGTaagtcatgatcatcatttatACGAATCTGAAAGCGATATGCTCTCAGAATTCGGTTATGCATCGGGATACACCGAACTCTCTGTTACAAGTGACTCCGAGAATCACCCTAGGCCAGTTGGTGTATCGTCAAGGCGACGAAAATCTCGGCAGAATCGAAACCAACGATACCAGAGTGATCCTATCCTCGGAGATATGGAATCGGACAGTACCAATGATGGATGCTTATTCGGAAATGGCATAACACCGAAGATGAAAACGAAAACGAATTCCGGTCAGAGGCGACAACGTGAAAGACGAAGGCAACGAAGACAGAATGCTAATAGAAATTCGTGGACAGATTCTGGTCTGTCGTTATCGAAAACTGATTCGCAACGCAGCAGTCATGGCGAAAATTCTCCGGTGAAACGAGGAAGATCGAAGACATCACCAGCAGATTTAGATCTGGACGCCCGAGACTTCGAAAAAAGCGAAGGAAAGACCGCTGACCATAGAAATGTAGATGATAAGGCAACATCGccaattcaaattgatagtgGGATCTATTCGCCAAATATGGAAACTGATTGTTCAAATATGGAGCGAGATTCTGTGTCACTTAGCAACATGACACTGAAAGGTGATGAATcagaaagcaacaacaacaacaacaacaatattgtAGATGATGTTTTTATTGAGAGCGACAAGGAAAATAGAAGAGAGACTGTTTTTGTTCTGTCAAGTTCCAAAACCCAAAATTTTGTCTCGGAGGAGCAATCTTTAAAGAGCCTCAGTTCAACTTCTAGTAGCCTCGATCACAGTTTTATCAACATCAAGCCAACAAATGCAAATGGAGTCGTGAATGGTACTTATTCCccgaaagaaaaagaaattctgcaacaagttttccaaaatgcaagaaaCTCGTGTAGCAGCATGAGACCTGACGATAATTCATCAGCCAAAAGAGAAGCTCTGAGAAGCCCCGCGTCAAGTTTTCCATTACCCCCTCATCTGGATTACCCTTTCTGTATGTATCGCAATGATGCAAAGCccaagaagaataagaaaccAGGGGGTTTCATCCGTGGATTCAAACGCCTCAAGGAAGGAATATCAAACAAACGAAGGTCATTTATAATGGGTGATGAAGCAAAGCTCACAAATGCCCGCGAATTTCATAACCAGACCCCCTTGGCCGTGAAAATCAGCAACTCAGTTGACAAGAAGAAAGGACTCCTAAAACGAATCTTCAAAACGCAGAATAACCAAAATTCAAAACCAAAATCGCAGAATTCCGCAAAGAAAGCGCAGAATTTTAGTCGGGACAGATTTGGAAGCTCCAGATCATTCTCGTCATCCATTGGTCAGCTTTGGTCACGTGGTAGCCGTGCTCGCACGCAGTCAATGGAGAATCTGAAGAACGTGTTTCGACGAGAGAAGGGAACTTCATTTATCAAAAGAAGTGTCAGTTCTACGTCACTTGCTGCGAAACTGCCCAGATCTCTCAGTCTGACCTCGCTGATTAGTCGACGCGGGAAACCGTTCACAAGGCATGGCTCTGTTGTCTCCGTTGCTGCTTCATGCTCACGTCAGCAAAATAATTACTCTGCTTTCCGCCGCGCTGACAGTGTTCGCTCATTACAAGGAGGCTACGACATCGCAACGAGGCTTCTTCAGTCTCAGAATGcttgcaaagaaaaacaattcaGTGAACAATATTATGAGGACTCAAATGACAATTACATGCCTCCGTATGGACAAGAAATGAACGTCCCGTTTCGTGCGGGCTGGAGGCCGTCATCGCGTATATCTCGCCGAGATCCATACTTGTATGAACAACAATACTATGAGGAGGATTTTGATCCTTATGATAACTGTTACGAGGATGAAGGTCCATGTACGTGTGGCTGTGAGGAACAGTATACTGATAATGGttgttattatgatgattatgaacaTTTTATAGGACATTCGTATGGTAAACAAGACTGTTACAACTCGCGCAATGCCATAAATCAACAATACTTTGAGAATAACCCACGTATGATTCCGAGCCGGCAGAGTTTCTCGCGGCAGTCAAGCCAGCAGATGATGACCAGTACGTACGCGCCAAGCCCAAATTTATCATCCAGCTATTATTCACCAAGAAGCTACCGCGCGGGGAATCGAATGGTCGTTGCACCGCTTAATGTTCAAGTCACTCAAGAACGAAGAGCCGAGAGGCGACAGCTGTCTCGTGCAAGTGAAGTATTCGATACAATGGTCTAA

Transcript

evm.model.HiC_scaffold_23.397

Protein

evm.model.HiC_scaffold_23.397

MNYRWLVVLVSVALFAAISGVRCASLAKDANWISSLESDKLDDAEIESLSFDDEHTGQEGSLQNSATIKDPTSDDLEKELDDISKENAKKDFDEQLSKREEGSLWTYSKIYDPKSEREDPSSGSSQGNNNNNQKSIEEINEEQKENIPVKIIDGDIAVDPDAPANDYEKRSSTSDMHYLWLDRVIPYTFDSSLSDSAKIAIRNAMAHYENKTCLRFTDDITNRTNWLNFFKAGGCWSYVGRLYYRYGRQNVSIGSGCESLGTILHEIMHAIGFNHEQARYDRDLYVEVLWENIKAEALNPCIPFWIPFTYSRKLQISADTLPVYMGPWRSTLFVFAVRTGLGSFKLELFSSLSTEPKPRNRYKWSTFRRFPELERTEDPDKSLSSKSCVNGSLICTCKEGNFRKKGRAYSQLFGTNYDYKGIMHYGRTYFTKNGRPTLLSLRNPNEQLGQRNDFTADDLTEINELYQCKKTTGGFTEWSSWGPCVVDTGTGAYVKYRQRYCYEKDVSKCTKPANAVVSQYGIVTEWKWTVTGVNGQIGVLMKERADMPRETEQENATILNQDVMELHVMVVRPKTGKSIWEAVVWTVVNFSGPYDCEFESSSKPLCHWQNLNANAPFLLGSGERRVLVLGQLVMQPMEAKIASILADFMDVALDEIMFTFAVDNCNPNPCQNFGSCTNSNGGYKCSCAVDYTGVNCETKIDYCNPNPCKNGGSCTSSNGVYTCLCLPGYTGQNCDTNIDYCNPNPCKNSGSCTNSNGGYKCSCAVDYTGVNCETKIDYCNPNPCKNSGSCTNSNGGYKCSCAVDYTGVNCETKIDYCNPNPCKNGGSCTSSNGVYTCLCLPGYTGQNCDTNIDYCNPNPCKNSGSCTNSNGGYKCSCAVDYTGVNCETKIDYCNPNPCKNSGSCTNSNGGYKCSCAVDYTGVNCETKIDYCNPNPCKNSGSCTNSNGGYKCSCAVDYTGVNCETRIDRCQPNPCQNAGTCYNTNGDYGCVCIGDFTGKNCETKINYCTPNPCQNNGSCSSVGGGYKCWCLPGYTGLNCETQVNYCNPNPCKNGGSCVNNNGGYTCLCPTGYTGLNCETNLDHCSPNPCRNAGSCLNVNGGYKCLCRPGYTGLNCDIHMGYCNPNPCQNGGSCTNTNGGHLCSCTPDYTGLNCETKFDYCIPNPCKNGGSCNNYTGGYWCQCPNGYTGSNCEIQINYCNPNPCKNGGSCVNNNGGYMCLCPAGYTGLNCETNVDHCNPNPCKNNGSCNNYNGGYWCQCPNGYTGSNCEIQINYCNPNPCKNGGSCVNNNGGYMCLCPAGYTGLHCETKSGGCIPNPCRNGGTFIDNNETTTYTCTCLYGYTGAKCEANIDECASDPCQNGGTCIDGVGGHSCTCAVGYTGSNCEENINECEPNPCQYGGVCHDGVDGHSCTCETGFTGTNCETSLENDACASNPCLNNRTCINDHGNYTCQCPFGYSGVHCETDINECASNPCQNGGTCNDGVGGYSCTCAVGYTGSNCEEKTNICNYADDTTIYASDKNLDNVIMRLENDSTIFIQWFEDNFMKLNTEKCHFMVLGKSANQTITVSVGDSIIENKDEEKLLGVIIDHKLTYETHINKLWYGHYMYIQTKAGEPGAKAVINIRLPASVVLTEYCLDFWYETRNIHHDILTVTSEDNAGDSTELLRKTGPHGDNWLNKKITFPASSVKGQFTLFESRTPYTLGLNLFVSAVIWYAFSRSEMRLGIQLKRKNHQSSAYPSVSTSLAAPKEIGFCLLEFSKLFFVALKGITISAKPLNERGRDTLSGLGLSPAGRLIIRSFEVPWSGLDEAVKCNNEPAVLEILSNLGLGFDCASKHEIQSVLNMGVSPDRIIFANPCKQASHLRYAAANDVALMTFDNEAELHKTKDLYPNAKLVIRIRVDDSKSLCQLGVKYGVPQGKTKGLLETAKRLGLNVVGVSFHVGSGCFDASAFYYAVKAAKQVFNEAESLGFDFTLLDIGGGFPGDNKAEISFEETADQLNRAFAKYFPVGCGVKIIAEPGRFFVSSAFTIACNITSVRSVHGDFSEKKNRKEMEIGDWIYFENMGAYTMAAASTFNGFMKPRIHYYIAESQYNSVRHLFQPVMERKQTLSDCYIFDERRGSFHIHYQRSVWNQADGQLNRKGALTRGSKYQHCSSIGSYLANLQNINCPTLPIGVKSWHYFDAAEDSQADRRWCTVWSQSLTQQTRGARRSICEVWSLKERFVFGAYRGFKNNTTTAYKLMNTATVSVFRVSISKREKKDEDNFRKTTGVLSPTTSPLFLKHLWTIDKCLPDKSRLDSKSNADYQMTEHCGMVMERKPVKVDRQKRLTRGNSHYEFLLSGFQLKESTAFRQNNAHPPVPVRSFIVPERICHKVEFKNIRNPVLHSARMSVEESLQYLDNTLAELDKVSHDHHLYESESDMLSEFGYASGYTELSVTSDSENHPRPVGVSSRRRKSRQNRNQRYQSDPILGDMESDSTNDGCLFGNGITPKMKTKTNSGQRRQRERRRQRRQNANRNSWTDSGLSLSKTDSQRSSHGENSPVKRGRSKTSPADLDLDARDFEKSEGKTADHRNVDDKATSPIQIDSGIYSPNMETDCSNMERDSVSLSNMTLKGDESESNNNNNNNIVDDVFIESDKENRRETVFVLSSSKTQNFVSEEQSLKSLSSTSSSLDHSFINIKPTNANGVVNGTYSPKEKEILQQVFQNARNSCSSMRPDDNSSAKREALRSPASSFPLPPHLDYPFCMYRNDAKPKKNKKPGGFIRGFKRLKEGISNKRRSFIMGDEAKLTNAREFHNQTPLAVKISNSVDKKKGLLKRIFKTQNNQNSKPKSQNSAKKAQNFSRDRFGSSRSFSSSIGQLWSRGSRARTQSMENLKNVFRREKGTSFIKRSVSSTSLAAKLPRSLSLTSLISRRGKPFTRHGSVVSVAASCSRQQNNYSAFRRADSVRSLQGGYDIATRLLQSQNACKEKQFSEQYYEDSNDNYMPPYGQEMNVPFRAGWRPSSRISRRDPYLYEQQYYEEDFDPYDNCYEDEGPCTCGCEEQYTDNGCYYDDYEHFIGHSYGKQDCYNSRNAINQQYFENNPRMIPSRQSFSRQSSQQMMTSTYAPSPNLSSSYYSPRSYRAGNRMVVAPLNVQVTQERRAERRQLSRASEVFDTMV

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P09057	Ornithine decarboxylase OS=Rattus norvegicus OX=10116 GN=Odc1 PE=1 SV=1
P00860	Ornithine decarboxylase OS=Mus musculus OX=10090 GN=Odc1 PE=1 SV=2
P27119	Ornithine decarboxylase OS=Mus pahari OX=10093 GN=Odc1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002012 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02784 all species →	Orn_Arg_deC_N	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF01400 all species →	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR034035 all species →	Domain	Astacin-like metallopeptidase domain	Interproscan
IPR001506 all species →	Domain	Peptidase M12A	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR022644 all species →	Domain	Orn/DAP/Arg decarboxylase 2, N-terminal	Interproscan
IPR002433 all species →	Family	Ornithine decarboxylase	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR000998 all species →	Domain	MAM domain	Interproscan
IPR029066 all species →	Homologous_superfamily	PLP-binding barrel	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000183 all species →	Family	Ornithine/DAP/Arg decarboxylase	Interproscan
IPR009006 all species →	Homologous_superfamily	Alanine racemase/group IV decarboxylase, C-terminal	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR051355 all species →	Family	Notch and Slit guidance protein	Interproscan
IPR006026 all species →	Domain	Peptidase, metallopeptidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45836 all species →	SLIT HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0006596 all species →	Biological Process	polyamine biosynthetic process	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007219 all species →	Biological Process	Notch signaling pathway	Interproscan
GO:0007411 all species →	Biological Process	axon guidance	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.HiC_scaffold_23.397.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Chrysaora quinquecirrha tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Chrysaora quinquecirrha, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →