Detailed information of evm.model.HiC_scaffold_234.2 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_234:10867...12770
NR annotation: XP_019630691.1, PREDICTED: laccase-4-like [Branchiostoma belcheri]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P06811Laccase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=lacc PE=1 SV=3
Q01679Laccase OS=Phlebia radiata OX=5308 GN=LAC PE=1 SV=2
J9VY90Laccase-1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=LAC1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000747 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07731
all species →		Cu-oxidase_2Multicopper oxidaseDomainInterproscan
PF00394
all species →		Cu-oxidaseMulticopper oxidaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033138
all species →		Conserved_siteMulticopper oxidases, conserved siteInterproscan
IPR008972
all species →		Homologous_superfamilyCupredoxinInterproscan
IPR045087
all species →		FamilyMulticopper oxidaseInterproscan
IPR011706
all species →		DomainMulticopper oxidase, C-terminalInterproscan
IPR002355
all species →		Binding_siteMulticopper oxidase, copper-binding siteInterproscan
IPR001117
all species →		DomainMulticopper oxidase, second cupredoxin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11709
all species →		MULTI-COPPER OXIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0005507
all species →		Molecular Functioncopper ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_234.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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