Detailed information of evm.model.HiC_scaffold_24.106 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_24:872971...873870
NR annotation: XP_015759870.1, PREDICTED: phosphonoacetaldehyde hydrolase-like [Acropora digitifera]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q38V12Phosphonoacetaldehyde hydrolase OS=Latilactobacillus sakei subsp. sakei (strain 23K) OX=314315 GN=phnX PE=3 SV=1
A5F051Phosphonoacetaldehyde hydrolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=phnX PE=3 SV=1
Q9KLY5Phosphonoacetaldehyde hydrolase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=phnX PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010653 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13419
all species →		HAD_2Haloacid dehalogenase-like hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050155
all species →		FamilyHAD-like hydrolase superfamilyInterproscan
IPR036412
all species →		Homologous_superfamilyHAD-like superfamilyInterproscan
IPR041492
all species →		FamilyHaloacid dehalogenase-like hydrolaseInterproscan
IPR006439
all species →		FamilyHAD hydrolase, subfamily IAInterproscan
IPR023214
all species →		Homologous_superfamilyHAD superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43434
all species →		PHOSPHOGLYCOLATE PHOSPHATASEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.HiC_scaffold_24.106. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_24.106.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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