Detailed information of evm.model.HiC_scaffold_25.106 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_25:1835553...1838119
NR annotation: ELT97716.1, hypothetical protein CAPTEDRAFT_167823 [Capitella teleta]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RF33Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26C PE=2 SV=1
O14972Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26C PE=1 SV=1
O35075Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps26c PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005414 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03643
all species →		Vps26Vacuolar protein sorting-associated protein 26 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014752
all species →		Homologous_superfamilyArrestin-like, C-terminalInterproscan
IPR028934
all species →		FamilyVacuolar protein sorting protein 26 relatedInterproscan
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12233
all species →		VACUOLAR PROTEIN SORTING 26 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K25730VPS26C; vacuolar protein sorting-associated protein 26C-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP