Detailed information of evm.model.HiC_scaffold_258.3 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_258:29234...31591
NR annotation: KAG5687295.1, hypothetical protein BaRGS_016896 [Batillaria attramentaria]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000406 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06229
all species →		FRG1FRG1-like domainDomainInterproscan
PF13676
all species →		TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010414
all species →		FamilyProtein FRG1Interproscan
IPR035897
all species →		Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR000157
all species →		DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR008999
all species →		Homologous_superfamilyActin-crosslinkingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46270
all species →		ARMADILLO-TYPE FOLD-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_258.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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