Detailed information of evm.model.HiC_scaffold_258.4 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_258:32695...33644
NR annotation: KAI0232223.1, Endoribonuclease YbeY [Lamellibrachia satsuma]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P58557Endoribonuclease YbeY OS=Homo sapiens OX=9606 GN=YBEY PE=1 SV=2
Q8CAV0Endoribonuclease YbeY OS=Mus musculus OX=10090 GN=Ybey PE=1 SV=1
A6Q9R0Endoribonuclease YbeY OS=Sulfurovum sp. (strain NBC37-1) OX=387093 GN=ybeY PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008183 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02130
all species →		YbeYEndoribonuclease YbeYFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002036
all species →		FamilyEndoribonuclease YbeYInterproscan
IPR020549
all species →		Conserved_siteEndoribonuclease YbeY, conserved siteInterproscan
IPR023091
all species →		Homologous_superfamilyMetalloprotease catalytic domain superfamily, predictedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46986
all species →		ENDORIBONUCLEASE YBEY, CHLOROPLASTICInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_258.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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