Detailed information of evm.model.HiC_scaffold_26.838 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_26:9177261...9186462
NR annotation: XP_031571800.1, uncharacterized protein LOC116305938 isoform X1 [Actinia tenebrosa]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005742 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.HiC_scaffold_26.838. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR038801
all species →		FamilyTATA box-binding protein-associated factor RNA polymerase I subunit CInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15319
all species →		TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001164
all species →		Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001650
all species →		Cellular Componentfibrillar centerInterproscan
GO:0006360
all species →		Biological Processtranscription by RNA polymerase IInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_26.838.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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