Detailed information of evm.model.HiC_scaffold_262.75 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_262:861426...871391
NR annotation: XP_008558693.1, NEDD8-conjugating enzyme Ubc12 [Microplitis demolitor]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A3KN22NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1
P61081NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens OX=9606 GN=UBE2M PE=1 SV=1
P61082NEDD8-conjugating enzyme Ubc12 OS=Mus musculus OX=10090 GN=Ube2m PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008187 (this species only) · gene tree & orthology
Ubiquitin familyE2|UBC|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UBC · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04752
all species →		ChaCChaC-like proteinFamilyInterproscan
PF00179
all species →		UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000608
all species →		DomainUbiquitin-conjugating enzyme E2Interproscan
IPR016135
all species →		Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR006840
all species →		FamilyGlutathione-specific gamma-glutamylcyclotransferaseInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR023313
all species →		Active_siteUbiquitin-conjugating enzyme, active siteInterproscan
IPR026170
all species →		FamilyN-lysine methyltransferase FAM173A/BInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13610
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006751
all species →		Biological Processglutathione catabolic processInterproscan
GO:0061928
all species →		Molecular Functionglutathione specific gamma-glutamylcyclotransferase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0016279
all species →		Molecular Functionprotein-lysine N-methyltransferase activityInterproscan
GO:0018023
all species →		Biological Processpeptidyl-lysine trimethylationInterproscan
GO:1905273
all species →		Biological Processpositive regulation of proton-transporting ATP synthase activity, rotational mechanismInterproscan
GO:1905706
all species →		Biological Processregulation of mitochondrial ATP synthesis coupled proton transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_262.75.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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