Detailed information of evm.model.HiC_scaffold_266.35 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_266:466080...471312
NR annotation: KAJ8048301.1, hypothetical protein HOLleu_00555 [Holothuria leucospilota]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000242 (this species only)
Transcription factor familyHTH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05225
all species →		HTH_psqhelix-turn-helix, Psq domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007889
all species →		DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006600
all species →		DomainHTH CenpB-type DNA-binding domainInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.HiC_scaffold_266.35. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_266.35.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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