Genomic Location: HiC_scaffold_27:2763246...2813199
NR annotation: XP_001634432.2, transforming growth factor-beta receptor-associated protein 1 [Nematostella vectensis]
Species Chrysaora quinquecirrha · all data for this species · gene families
| CDS |
| evm.model.HiC_scaffold_27.201 |
| Transcript |
| evm.model.HiC_scaffold_27.201 |
| Protein |
| evm.model.HiC_scaffold_27.201 |
| UniProt accession | Description |
|---|---|
| A4IG72 | Transforming growth factor-beta receptor-associated protein 1 homolog OS=Danio rerio OX=7955 GN=tgfbrap1 PE=2 SV=1 |
| A7MB11 | Transforming growth factor-beta receptor-associated protein 1 OS=Bos taurus OX=9913 GN=TGFBRAP1 PE=2 SV=1 |
| Q3UR70 | Transforming growth factor-beta receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Tgfbrap1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004078 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10366 all species → | Vps39_1 | Vacuolar sorting protein 39 domain 1 | Repeat | Interproscan |
| PF08170 all species → | POPLD | POPLD (NUC188) domain | Domain | Interproscan |
| PF00028 all species → | Cadherin | Cadherin domain | Domain | Interproscan |
| PF06978 all species → | POP1_N | Ribonucleases P/MRP protein subunit POP1, N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019452 all species → | Domain | Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 | Interproscan |
| IPR015919 all species → | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR020894 all species → | Conserved_site | Cadherin conserved site | Interproscan |
| IPR002126 all species → | Domain | Cadherin-like | Interproscan |
| IPR012590 all species → | Domain | POPLD domain | Interproscan |
| IPR001180 all species → | Domain | Citron homology (CNH) domain | Interproscan |
| IPR039182 all species → | Family | Ribonucleases P/MRP protein subunit Pop1 | Interproscan |
| IPR009723 all species → | Domain | Pop1, N-terminal | Interproscan |
| IPR000547 all species → | Repeat | Clathrin, heavy chain/VPS, 7-fold repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22731 all species → | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0007155 all species → | Biological Process | cell adhesion | Interproscan |
| GO:0007156 all species → | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0000172 all species → | Cellular Component | ribonuclease MRP complex | Interproscan |
| GO:0001682 all species → | Biological Process | tRNA 5'-leader removal | Interproscan |
| GO:0005655 all species → | Cellular Component | nucleolar ribonuclease P complex | Interproscan |
| GO:0008033 all species → | Biological Process | tRNA processing | Interproscan |
| GO:0006886 all species → | Biological Process | intracellular protein transport | Interproscan |
| GO:0016192 all species → | Biological Process | vesicle-mediated transport | Interproscan |
evm.model.HiC_scaffold_27.201.