Detailed information of evm.model.HiC_scaffold_27.225 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:3147127...3155611
NR annotation: XP_044168519.1, beta-galactosidase-like [Acropora millepora]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q58D55Beta-galactosidase OS=Bos taurus OX=9913 GN=GLB1 PE=2 SV=1
Q5R7P4Beta-galactosidase OS=Pongo abelii OX=9601 GN=GLB1 PE=2 SV=1
P16278Beta-galactosidase OS=Homo sapiens OX=9606 GN=GLB1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000517 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21317
all species →		BetaGal_ABD_1Beta-galactosidase, first all-beta domainDomainInterproscan
PF21467
all species →		BetaGal_gal-bdBeta-galactosidase, galactose-binding domainDomainInterproscan
PF01301
all species →		Glyco_hydro_35Glycosyl hydrolases family 35DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048912
all species →		DomainBeta-galactosidase 1-like , first all-beta domainInterproscan
IPR019801
all species →		Conserved_siteGlycoside hydrolase, family 35, conserved siteInterproscan
IPR001944
all species →		FamilyGlycoside hydrolase, family 35Interproscan
IPR048913
all species →		DomainBeta-galactosidase, galactose-binding domainInterproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR031330
all species →		DomainGlycoside hydrolase 35, catalytic domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23421
all species →		BETA-GALACTOSIDASE RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0004565
all species →		Molecular Functionbeta-galactosidase activityInterproscan
GO:0005773
all species →		Cellular ComponentvacuoleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_27.225.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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