Detailed information of evm.model.HiC_scaffold_27.92 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:1272430...1281855
NR annotation: XP_016403268.1, PREDICTED: mothers against decapentaplegic homolog 6-like [Sinocyclocheilus rhinocerous]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O43541Mothers against decapentaplegic homolog 6 OS=Homo sapiens OX=9606 GN=SMAD6 PE=1 SV=2
Q9W734Mothers against decapentaplegic homolog 6 OS=Gallus gallus OX=9031 GN=SMAD6 PE=2 SV=1
O35182Mothers against decapentaplegic homolog 6 OS=Mus musculus OX=10090 GN=Smad6 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007814 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03166
all species →		MH2MH2 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017855
all species →		Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR001132
all species →		DomainSMAD domain, Dwarfin-typeInterproscan
IPR008984
all species →		Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR013790
all species →		FamilyDwarfinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13703
all species →		SMADInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179
all species →		Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653
all species →		Biological Processanatomical structure morphogenesisInterproscan
GO:0030154
all species →		Biological Processcell differentiationInterproscan
GO:0060395
all species →		Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411
all species →		Molecular FunctionI-SMAD bindingInterproscan
GO:0071144
all species →		Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0140416
all species →		Molecular Functiontranscription regulator inhibitor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_27.92.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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