Gene detail

Detailed information of evm.model.HiC_scaffold_27.97 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:1361869...1367815
NR annotation: CAH3120310.1, unnamed protein product [Porites lobata]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P83111	Serine beta-lactamase-like protein LACTB, mitochondrial OS=Homo sapiens OX=9606 GN=LACTB PE=1 SV=2
Q9EP89	Serine beta-lactamase-like protein LACTB, mitochondrial OS=Mus musculus OX=10090 GN=Lactb PE=1 SV=1
P83095	Serine beta-lactamase-like protein LACTB, mitochondrial OS=Bos taurus OX=9913 GN=LACTB PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004050 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00144 all species →	Beta-lactamase	Beta-lactamase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012338 all species →	Homologous_superfamily	Beta-lactamase/transpeptidase-like	Interproscan
IPR052794 all species →	Family	Mitochondrial Serine Protease LACTB	Interproscan
IPR001466 all species →	Domain	Beta-lactamase-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46520 all species →	SERINE BETA-LACTAMASE-LIKE PROTEIN LACTB, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0019216 all species →	Biological Process	regulation of lipid metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17382	LACTB; serine beta-lactamase-like protein LACTB, mitochondrial	-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.