Detailed information of evm.model.HiC_scaffold_28.28 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_28:316993...364538
NR annotation: XP_002164616.2, dimethylaniline monooxygenase [N-oxide-forming] 2 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DBJ3BAR/IMD domain-containing adapter protein 2-like 1 OS=Mus musculus OX=10090 GN=Baiap2l1 PE=1 SV=1
Q3KR97BAR/IMD domain-containing adapter protein 2-like 1 OS=Rattus norvegicus OX=10116 GN=Baiap2l1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012492 (this species only) · gene tree & orthology
Transcription factor familybHLH · all TF in this species
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00042
all species →
GlobinGlobinDomainInterproscan
PF08397
all species →
IMDIRSp53/MIM homology domainFamilyInterproscan
PF00018
all species →
SH3_1SH3 domainDomainInterproscan
PF00010
all species →
HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF13738
all species →
Pyr_redox_3Pyridine nucleotide-disulphide oxidoreductaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR000971
all species →
DomainGlobinInterproscan
IPR027681
all species →
FamilyI-BAR domain containing protein IRSp53/IRTKS/PinkbarInterproscan
IPR044399
all species →
DomainMyoglobin-like, M family globin domainInterproscan
IPR036638
all species →
Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR036188
all species →
Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR011598
all species →
DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR009050
all species →
Homologous_superfamilyGlobin-like superfamilyInterproscan
IPR012292
all species →
Homologous_superfamilyGlobin/ProtoglobinInterproscan
IPR013606
all species →
DomainIMD/I-BAR domainInterproscan
IPR027267
all species →
Homologous_superfamilyAH/BAR domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14206
all species →
BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0020037
all species →
Molecular Functionheme bindingInterproscan
GO:0005654
all species →
Cellular ComponentnucleoplasmInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0030838
all species →
Biological Processpositive regulation of actin filament polymerizationInterproscan
GO:0051017
all species →
Biological Processactin filament bundle assemblyInterproscan
GO:0051764
all species →
Biological Processactin crosslink formationInterproscan
GO:2000251
all species →
Biological Processobsolete positive regulation of actin cytoskeleton reorganizationInterproscan
GO:0046983
all species →
Molecular Functionprotein dimerization activityInterproscan
GO:0019825
all species →
Molecular Functionoxygen bindingInterproscan
GO:0007009
all species →
Biological Processplasma membrane organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_28.28.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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