Detailed information of evm.model.HiC_scaffold_29.1095 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:7460613...7465943
NR annotation: CAB3981681.1, probable peptidyl-tRNA hydrolase 2 [Paramuricea clavata]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O76387Probable peptidyl-tRNA hydrolase 2 OS=Caenorhabditis elegans OX=6239 GN=C24G6.8 PE=3 SV=1
Q877G5Peptidyl-tRNA hydrolase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=pth PE=3 SV=1
Q980V1Peptidyl-tRNA hydrolase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=pth PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009317 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01981
all species →		PTH2Peptidyl-tRNA hydrolase PTH2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023476
all species →		Homologous_superfamilyPeptidyl-tRNA hydrolase II domain superfamilyInterproscan
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan
IPR002833
all species →		FamilyPeptidyl-tRNA hydrolase, PTH2Interproscan
IPR015940
all species →		DomainUbiquitin-associated domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12649
all species →		PEPTIDYL-TRNA HYDROLASE 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0004045
all species →		Molecular Functionaminoacyl-tRNA hydrolase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04794PTH2, PTRH2; peptidyl-tRNA hydrolase, PTH2 familyEC:3.1.1.29
Translation factorsko03012deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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