Detailed information of evm.model.HiC_scaffold_29.1144 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:8156753...8171276
NR annotation: XP_047145531.1, 2-oxoglutarate dehydrogenase, mitochondrial [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q022182-oxoglutarate dehydrogenase complex component E1 OS=Homo sapiens OX=9606 GN=OGDH PE=1 SV=3
Q60HE22-oxoglutarate dehydrogenase complex component E1 OS=Macaca fascicularis OX=9541 GN=OGDH PE=2 SV=1
Q605972-oxoglutarate dehydrogenase complex component E1 OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001314 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00676
all species →		E1_dhDehydrogenase E1 componentFamilyInterproscan
PF16078
all species →		2-oxogl_dehyd_N2-oxoglutarate dehydrogenase N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001017
all species →		DomainDehydrogenase, E1 componentInterproscan
IPR029061
all species →		Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR032106
all species →		Domain2-oxoglutarate dehydrogenase E1 component, N-terminal domainInterproscan
IPR011603
all species →		Family2-oxoglutarate dehydrogenase E1 componentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23152
all species →		2-OXOGLUTARATE DEHYDROGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016624
all species →		Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptorInterproscan
GO:0004591
all species →		Molecular Functionoxoglutarate dehydrogenase (succinyl-transferring) activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006099
all species →		Biological Processtricarboxylic acid cycleInterproscan
GO:0030976
all species →		Molecular Functionthiamine pyrophosphate bindingInterproscan
GO:0045252
all species →		Cellular Componentoxoglutarate dehydrogenase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_29.1144.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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