Detailed information of evm.model.HiC_scaffold_29.365 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:2429318...2430213
NR annotation: MCP3926072.1, hypothetical protein [Desulfobacterales bacterium]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14381Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000039 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31635
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.HiC_scaffold_29.365. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_29.365.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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