Detailed information of evm.model.HiC_scaffold_296.5 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_296:98467...106029
NR annotation: XP_047129040.1, uncharacterized protein LOC100199386 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O15034RIMS-binding protein 2 OS=Homo sapiens OX=9606 GN=RIMBP2 PE=1 SV=3
Q8QFX1RIMS-binding protein 2 OS=Gallus gallus OX=9031 GN=RIMBP2 PE=1 SV=1
Q80U40RIMS-binding protein 2 OS=Mus musculus OX=10090 GN=Rimbp2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001603 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07653
all species →		SH3_2Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452
all species →		DomainSH3 domainInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR040325
all species →		FamilyRIMS-binding protein 1/2/3Interproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14234
all species →		RIM BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007274
all species →		Biological Processneuromuscular synaptic transmissionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_296.5.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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