Detailed information of evm.model.HiC_scaffold_3.57 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_3:728442...733349
NR annotation: XP_039614132.1, tetratricopeptide repeat protein 39B isoform X2 [Polypterus senegalus]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28DB0Tetratricopeptide repeat protein 39B OS=Xenopus tropicalis OX=8364 GN=ttc39b PE=2 SV=1
Q5XHH9Tetratricopeptide repeat protein 39B OS=Xenopus laevis OX=8355 GN=ttc39b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001120 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.HiC_scaffold_3.57. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR019412
all species →		FamilyInclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31859
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBERInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.HiC_scaffold_3.57. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_3.57.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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