Detailed information of evm.model.HiC_scaffold_31.395 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_31:4733899...4740736
NR annotation: XP_044177153.1, LOW QUALITY PROTEIN: uncharacterized protein LOC122959721 [Acropora millepora]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q54KD0TPR repeat-containing protein DDB_G0287407 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287407 PE=4 SV=1
Q99973Telomerase protein component 1 OS=Homo sapiens OX=9606 GN=TEP1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000365 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13271
all species →		DUF4062Domain of unknown function (DUF4062)FamilyInterproscan
PF05729
all species →		NACHTNACHT domainDomainInterproscan
PF17908
all species →		APAF1_CAPAF-1 helical domainDomainInterproscan
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025139
all species →		DomainDomain of unknown function DUF4062Interproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR041452
all species →		DomainAPAF-1 helical domainInterproscan
IPR011047
all species →		Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR052752
all species →		FamilyNACHT and WD repeat domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19871
all species →		BETA TRANSDUCIN-RELATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_31.395.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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