Gene detail

Detailed information of evm.model.HiC_scaffold_31.70 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_31:1161851...1177969
NR annotation: XP_031554935.1, guanylate cyclase soluble subunit beta-1-like [Actinia tenebrosa]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.HiC_scaffold_31.70

ATGCCATTGCTCAacttaaaaaaatcaaaaccaCTTGTCAAATGCCACAAAACCCATTTCGCCAGACCAACtcatgttgttgatgttgtttatGCAAGATGCTTGGCGGCAGAGTTTTCTCTGCTCTTCTGTTCGATACGTGGAAGAGTTCCCGACGAGATTTTGATCCTGAGACGAGTGTCCTGGTCACCAattgttgatgattttgattatgatgctggtaatgatgataaagattcCACGGAACCGTTCCCCTTCTGGGACGATTTGAAAGCGTTCCTAAACTGGTACGGATGGCATTCCCAGACGGGAATGGATCATGTCcttcccgtAAAAACAGCTGGAATAGAGCTGGAAGGTGGAACCTACCTGATTCACAATATTTATACCGACGAAGAAACATACAAGTTGGTTGGGGCATCATGCTCGGTACTAGGCCTATCACTTGACGTTGTCCTTGAAAAGTTCGGTGAGCATTTCTTCAAATATTGCGTTCAGTCTGGCTATGATCGTATTCTACGTGTTCTGGGAAGAAATCTTATGGAGTTTTTATCCAACCTTGACGCTCTACATGATCATTTGGCATCCATCTACTCTGGTATCACGGCACCTTCATTTCGGACAACGGATCGCAGTGACGGGGCATTATTGCTCCATTATTACTCATGCCGAGAAGGCCTAAGTCATATCGTAATTGGCATTGTTAAAACTGTGGCACAGGAGATCTTAGGAACGACAATTCAGATGGAAATATTGCAGCATAAAAATGAAGTTCATGATCACACAATATTTCTAATCAAGGCACAGAATTCTTTTCACCGAAGACCAAGTAATTCACGGATAACTTTGAGCGGCCTCTCTTCCACTCATCAAACCAAGCTTGGGACTGGACAATTTAACACGATTAAGAGGCTGAGAAGTGATAAGCTAAAGTCTTCAATGAGCGTGTTGTCGTTTTGTAAATGCTTCCCATTTCACATTGTTTTCGATCGAAATCTGATAATAAGACAATCAGGTCATTGTATAAGAAAGTACTTGGAAAGGTTTCCTTCCGGCCAAGCCAAAAAGGGCCTAGTCTTCAACGAGCTATTCGAACTTTCAAGACCGCGCATGGCGTTTTCTTTCGACTCAATCCTTGCACATATCAACACTGTGTTTATTGTTGTTTCTCGCAACAGCGCGGGAAACTTCCGCAAGATATCTCCAGACCAGCGGCGAGATAACAACGCGGGATTTGCAATGGCAAATCTAATGGACCCGAACCAGCCGACGATCTCCGATTTAAAAGAATCCGGAGTTAGATTCTCCGACATTCCGCTTCACGACGCCACTCGAGAACTTGTGCTTACCGCTCACGCGCATCGGCCAGCAAGAGAGCTGATTGAGAAACTCGAACAAAGTACGAACAAATTACGAAAACTTCAAGTTCGATTGATCGACGACAAAAAGACAACGGATGATCTTCTACACGAGATACTACCGGCGAAAGTTGCAGCGAAGTTACGACTTAACGAGCCTGTTCCTGGCGAAAAATACGCACTTGTCACGATACTATTCTCAGATATTGTCGGATTTACGGCACTTTGCTCGAACGAGAAAGTTGTTCCAATGGACATCGTCAAGCTGCTGAATAAACTGTACACGTTGTTTGATATGATGTCAAGTCATTATGACGTATATAAGGTTGAAACAATCGGTGATGCATACATGGTAGTTGGGGGTCTACCAAACTCATGCTCTGATCATGCCGAGAAAGTTGCCAATATGGCATGCAGTATGCTTGATGCCGTTACAAATGTCTACTCTCCGGTCGACAGCCAACCAATcaagATTCGAATCGGATTACACTCTGGGCCTGTGATGGCTGGTGTCGTGGGCAAGAAAATGCCAAGATACTGCTTATTTGGAAGTTCTGTTACAATTGCTAATAAAATGGAATCGCAAAGTTCACCTGGAAAAATCAATGTCAGTGTTGAGACAAGAAAATTTATTGCAAGTTGGGAGCGGTTCCTCCAGCCCAAAGTACACACTGCATGGAGAACATTCGGTTCAATTTTCGGTTTCTATGataaatatgatgatgatgatgacaatgatgatggtgatgatgacaatgatgatggtggtgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgataatgatgatgatgcagttAGAACCTATTGTCTTCCCACTTTTCTCATATCAACAGTTCCCTATTCAAAAAAGGGTTTAGGAATGACAGCTTACTTTGGATTTCTGGAAATTTGTGAGCCACGTCCAAATGAGACAGTTGTCGTTAATGGTGCAGCTGGGGCAGTTGGTGCATTGGTTGGGCAAATTGCAAAAATCAAAGGTTGCAGGGTAGTTGGTTTTGCTGGGACGGATAAAAAAGTAGAATATCTTAAAAGCATTGGATTTGATGAAGCTTTTAATTATAAAACCATCACTTCATTGGATGAAACATTGAAAAACTCTTGCCCTAAAGGAGTTGATTGTTTCTTTGACAATGTGAGTTGGGGTAAGTTTTTTGACACTGTGATGGAGCACATGAACCATAGAGGCAGGGTATCAATATGTGGGGCAATTTCAACATATAATGTTGAAGGTGAACAGCCAAAAGAGCAAAATTATGGACAGCTATTTTTCCTTTTAGGTCCATATGTTCACATGCATGCGATAACCAAAGAACTCAGACTAGAAGGTTTCATAGTTACAagattcaaaaataaattcccaACAGCTATTGAAGAAATGAAGCAATGGATAAATGAGGGAAAGTTAAAAGTTACAGAACATGTTGTCGATGGATTTGAGAATCTACCAAAAGCATTTATTGGTCTGTTTGAAGGTGACAATTTGGGAAAAGCTGTTGTAAATGTGTAA

Transcript

evm.model.HiC_scaffold_31.70

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O54865	Guanylate cyclase soluble subunit beta-1 OS=Mus musculus OX=10090 GN=Gucy1b1 PE=1 SV=1
Q02153	Guanylate cyclase soluble subunit beta-1 OS=Homo sapiens OX=9606 GN=GUCY1B1 PE=1 SV=1
Q4ZHR9	Guanylate cyclase soluble subunit beta-1 OS=Canis lupus familiaris OX=9615 GN=GUCY1B1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001319 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07700 all species →	HNOB	Haem-NO-binding	Domain	Interproscan
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF00211 all species →	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan
PF07701 all species →	HNOBA	Heme NO binding associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001054 all species →	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR024096 all species →	Homologous_superfamily	NO signalling/Golgi transport ligand-binding domain superfamily	Interproscan
IPR038158 all species →	Homologous_superfamily	H-NOX domain superfamily	Interproscan
IPR042463 all species →	Homologous_superfamily	Haem NO binding associated domain superfamily	Interproscan
IPR011644 all species →	Domain	Heme NO-binding	Interproscan
IPR029787 all species →	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR011645 all species →	Domain	Haem NO binding associated	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45655 all species →	GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004383 all species →	Molecular Function	guanylate cyclase activity	Interproscan
GO:0008074 all species →	Cellular Component	guanylate cyclase complex, soluble	Interproscan
GO:0019934 all species →	Biological Process	cGMP-mediated signaling	Interproscan
GO:0070482 all species →	Biological Process	response to oxygen levels	Interproscan
GO:0009190 all species →	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0006182 all species →	Biological Process	cGMP biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.HiC_scaffold_31.70.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.