Gene detail

Detailed information of evm.model.HiC_scaffold_317.14 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_317:218502...229602
NR annotation: XP_047142282.1, protein arginine N-methyltransferase 5-like [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CIG8	Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=3
A7YW45	Protein arginine N-methyltransferase 5 OS=Bos taurus OX=9913 GN=PRMT5 PE=2 SV=1
O14744	Protein arginine N-methyltransferase 5 OS=Homo sapiens OX=9606 GN=PRMT5 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006977 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17286 all species →	PRMT5_C	PRMT5 oligomerisation domain	Domain	Interproscan
PF17285 all species →	PRMT5_TIM	PRMT5 TIM barrel domain	Domain	Interproscan
PF05185 all species →	PRMT5	PRMT5 arginine-N-methyltransferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007857 all species →	Family	Protein arginine N-methyltransferase PRMT5	Interproscan
IPR025799 all species →	Family	Protein arginine N-methyltransferase	Interproscan
IPR035248 all species →	Domain	PRMT5, oligomerisation domain	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR035247 all species →	Domain	PRMT5, TIM barrel domain	Interproscan
IPR035075 all species →	Domain	PRMT5 arginine-N-methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10738 all species →	PROTEIN ARGININE N-METHYLTRANSFERASE 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006479 all species →	Biological Process	protein methylation	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0035246 all species →	Biological Process	peptidyl-arginine N-methylation	Interproscan
GO:0016274 all species →	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216 all species →	Biological Process	peptidyl-arginine methylation	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008469 all species →	Molecular Function	histone arginine N-methyltransferase activity	Interproscan
GO:0034969 all species →	Biological Process	obsolete histone arginine methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.HiC_scaffold_317.14.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.