Detailed information of evm.model.HiC_scaffold_32.301 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:3658224...3688952
NR annotation: XP_031572210.1, ubiquitin carboxyl-terminal hydrolase 32-like [Actinia tenebrosa]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F8VPZ3Ubiquitin carboxyl-terminal hydrolase 32 OS=Mus musculus OX=10090 GN=Usp32 PE=2 SV=1
Q8NFA0Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens OX=9606 GN=USP32 PE=1 SV=1
P35125Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens OX=9606 GN=USP6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003533 (this species only) · gene tree & orthology
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06337
all species →		DUSPDUSP domainDomainInterproscan
PF00443
all species →		UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050185
all species →		FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR003604
all species →		DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR006615
all species →		DomainPeptidase C19, ubiquitin-specific peptidase, DUSP domainInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR018200
all species →		Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR028889
all species →		DomainUbiquitin specific protease domainInterproscan
IPR035927
all species →		Homologous_superfamilyDUSP-like superfamilyInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR001394
all species →		DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646
all species →		UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_32.301.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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