Detailed information of evm.model.HiC_scaffold_32.337 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:4612083...4625930
NR annotation: CAH3157934.1, unnamed protein product [Porites lobata]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9YHZ6Cell division control protein 45 homolog OS=Xenopus laevis OX=8355 GN=cdc45 PE=1 SV=2
Q9Z1X9Cell division control protein 45 homolog OS=Mus musculus OX=10090 GN=Cdc45 PE=1 SV=2
O75419Cell division control protein 45 homolog OS=Homo sapiens OX=9606 GN=CDC45 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005311 (this species only)
Ubiquitin familyULD|UBL|NEDD8 · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17840
all species →		TugsTethering Ubl4a to BAGS domainDomainInterproscan
PF00240
all species →		ubiquitinUbiquitin familyDomainInterproscan
PF02724
all species →		CDC45CDC45-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003874
all species →		FamilyCDC45 familyInterproscan
IPR041421
all species →		DomainUbl4, C-terminal TUGS domainInterproscan
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10507
all species →		CDC45-RELATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000727
all species →		Biological Processdouble-strand break repair via break-induced replicationInterproscan
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0003688
all species →		Molecular FunctionDNA replication origin bindingInterproscan
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006270
all species →		Biological ProcessDNA replication initiationInterproscan
GO:0031261
all species →		Cellular ComponentDNA replication preinitiation complexInterproscan
GO:1902977
all species →		Biological Processmitotic DNA replication preinitiation complex assemblyInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_32.337.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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