Detailed information of evm.model.HiC_scaffold_32.558 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:7187447...7199396
NR annotation: XP_002156254.2, chitinase 3 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5E9U1P2X purinoceptor 4 OS=Bos taurus OX=9913 GN=P2RX4 PE=2 SV=1
P51577P2X purinoceptor 4 OS=Rattus norvegicus OX=10116 GN=P2rx4 PE=1 SV=1
Q99571P2X purinoceptor 4 OS=Homo sapiens OX=9606 GN=P2RX4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001026 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00864
all species →		P2X_receptorATP P2X receptorFamilyInterproscan
PF00704
all species →		Glyco_hydro_18Glycosyl hydrolases family 18DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001429
all species →		FamilyP2X purinoreceptorInterproscan
IPR001223
all species →		DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR027309
all species →		Homologous_superfamilyP2X purinoreceptor extracellular domain superfamilyInterproscan
IPR001579
all species →		Active_siteGlycosyl hydrolases family 18 (GH18) active siteInterproscan
IPR045321
all species →		DomainChitinase Cts1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10125
all species →		P2X PURINOCEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001614
all species →		Molecular Functionpurinergic nucleotide receptor activityInterproscan
GO:0004931
all species →		Molecular Functionextracellularly ATP-gated monoatomic cation channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0033198
all species →		Biological Processresponse to ATPInterproscan
GO:0098655
all species →		Biological Processmonoatomic cation transmembrane transportInterproscan
GO:0005639
all species →		Cellular Componentobsolete integral component of nuclear inner membraneInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_32.558.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP