Detailed information of evm.model.HiC_scaffold_32.615 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:7776255...7834573
NR annotation: XP_048581310.1, uncharacterized protein LOC5512067 isoform X5 [Nematostella vectensis]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZXK9Notchless protein homolog 1 OS=Xenopus laevis OX=8355 GN=nle1 PE=2 SV=1
Q9NVX2Notchless protein homolog 1 OS=Homo sapiens OX=9606 GN=NLE1 PE=1 SV=4
Q8VEJ4Notchless protein homolog 1 OS=Mus musculus OX=10090 GN=Nle1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004855 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00086
all species →
Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan
PF01549
all species →
ShKShK domain-likeDomainInterproscan
PF08154
all species →
NLENLE (NUC135) domainDomainInterproscan
PF00014
all species →
Kunitz_BPTIKunitz/Bovine pancreatic trypsin inhibitor domainDomainInterproscan
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000716
all species →
DomainThyroglobulin type-1Interproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR036880
all species →
Homologous_superfamilyPancreatic trypsin inhibitor Kunitz domain superfamilyInterproscan
IPR036857
all species →
Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR003582
all species →
DomainShKT domainInterproscan
IPR002223
all species →
DomainPancreatic trypsin inhibitor Kunitz domainInterproscan
IPR020901
all species →
Conserved_siteProteinase inhibitor I2, Kunitz, conserved siteInterproscan
IPR019775
all species →
Conserved_siteWD40 repeat, conserved siteInterproscan
IPR012972
all species →
DomainNLEInterproscan
IPR020472
all species →
RepeatG-protein beta WD-40 repeatInterproscan
IPR051950
all species →
FamilyDevelopmental regulator and protease inhibitorInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12352
all species →
SECRETED MODULAR CALCIUM-BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0004867
all species →
Molecular Functionserine-type endopeptidase inhibitor activityInterproscan
GO:0005615
all species →
Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_32.615.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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