Gene detail

Detailed information of evm.model.HiC_scaffold_32.656 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:8185923...8214042
NR annotation: XP_047142238.1, polycystic kidney disease and receptor for egg jelly-related protein [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.HiC_scaffold_32.656

ATGTGGTTAGATGTGAATACGAGGTTGTTTAGCGTAAGTGAGGCAGTCAGCAACAACCCCCCTTTCGCCTCCAGCCTCCTTCGCCTTTCCCGCCTTTCATCAAGGATTAATCAAGTCATGGAGGGCCTTAAATCAAGGGTTTCTCATCTTGAAGACTCATTTAAAAGCATTAATATAACACAAGAGGCTCTCAACAAATGTGGCCTAACAGGAATCAACTTGAGAGATTATCAGATATGTGGCATAAATTGGCTGGGATCGTGTTATTTGAATGAGCAACAAAATGGATGCATTCTTGGGGATGAGATGGGCCTTGGCAAAACTATCCAGaCATTGTCTTTTCTGGCTTACAATtaccaaaatgaaacaaagagaCCAACAGGTCCATCTCTTATTTTGGCCCCTCTATCAGTCTTAGGAAACTGGAAATCAGAACTGGAAAGATATACACCATGCTTAAAGCTGTTGGAATATGTTGGAGATAAAGATCAAAGGCAACAATTCAGAGATTCTATGGGCCATCTTGCAAACTCTAATTTTGATGGTTGGAAAACTGATGAAAAGTCATTTGATGTGATGTTGACTTCTTATGAGATTTGTTTGAAGGATTCCAGTTTCTTAAACAGATTTAAATGGGATGCTTTGGTCGTTGATGAAGCTCATCGtctgaaaaattcaaaatcactATTATATTGCAAACTTACAGAGTTTTGTATATGCTTTAAAGTCCTGCTCACTGGAACTCCTGTGCAAAATAATCTTCAAGagATCTATTCTTTGTTGTCATTTATCTGCCCtagaattttcaaactttgtgaAGCTGATCaatttgttgaatattttcaaaatatcgtATCTGGAATGGATTCAGAATCTGCAAATGAGCTCACTTCATTTTTGAAACCTTTTCTTCTTCGCAGAAAGAAAGACGAGGTTATGGCTGATATTCCAACGAAGTCTGAGGTAATTTTGCATACAAAGATGTCATCTGTTCAGAAGAAACTCTACAAAGCAATATTATCTAAAGATTTAGATGCATTACTTGATAAAGTACCACAAAAATCTCGTCTTATTAACATCCTTATGGAACTGAGAAAATGTTGTAATCATCCATATATCTTTCCTGGTATTGAACCAGAACCATTTGAAATGGGTGAACATTTGATCTCAGCTAGTGGTAAATTATCACTTCTGGACAAAATCCTGAAATTTCTAAATTTGAAtGGACATCGCGTTCTTATATTCTCACAATTCACGACCATGTTAGACATTTTGCAAGATTATTTGACTTATAAAGGCTATGCATACGAAAGGCTTGATGGCTCTGTGAGAGGCGAAGAGCGATATCTTGCAGTTAATAATTTCAATCAATCAAATGCAACATTCGTTTTCCTTCTTAGTACTCGTGCAGGTGGTCAGGGATTGAATCTGATGACTGCTGATACTGTTATATTTTTTGACAATGATTTCAACCCTCAAAACGATCTTCAAGCTGCAGCCAGAGCTCACAGAATTGGACAAAAAAGACCAGTGAAAGTTATTCGTTTATTGTCAAAATGTACAGTGGAAGAAATAATACTGAAACGTGCATTGAGTAAATTGAAACTCACAGAAACTGTATTGGAAGGAGGTCAGTTTTCTAATCTGCAAAAGTCTTTGAGCTCTGCAAATGAGCTCCCTGATATTCTTAAATATGGTCTGGAAAATCTTATGAACACAGCTGAAGGCacagaagaagacgaagaaatcgaaagTTTGTTAGGAGGTTCTGCAAATGGAGAATGGATAATTGAGGAAAACAAATCAAGAAATGAAATCGTAAACAAACAAAAGGATGAACAAACAAATAAAGATAATATTTATTTATATGAGGGTCAAGATTATAGTAAATTTGCAAGTAATGCAGATAGAAGTGCCTTTGATCTTCTCATTGCTGaaaatTCTGTGGCGGAAGAGAGATCTTCTAGAAGAGACAAAAATACTACAGTTCTGTTATTTCAAATGGGACCAAAAAGAGCTCGAAGAGAATTAACAGAagaagagaaaattgaaaggaaaatgaagCGTGAAGAAAATGCTGCAAAAAGAGCCAAATTAATTGAAGATgagaaagaaaggaagaaggagcaacaaaaattaaaaagAGAAAAACTTTGGAAAGAAAGCAACTACGAAACAATGAATGTTGTAAATGACGAAAGTGACGAATCTGATAATGAAATTGTAGAATCTGAAGAGGATAATTCACTTCAAATAAATTATGTTGTTGGTGATGTTTTACAACCAGTTCAAACTGGATCACAAGATGCTATTGTTATTCATTGTGTTGATAATTCCGGTTACTGGGGCAGAGGTGGATTGTTTTCTGCAATTTCATCAAGATCTTCCAACCCGGAACGTCAATATGAATTAGCTGGCAAAATGAAAGATTTGAATCTTGGCGATGCACATTTGATTCCTATTGATGACAAAATCAGTCGACAAAACGGCCGTGATTTGGTTGCACTTATTGTCTGTCAAAGCAGAGATAGAAATAACAGATTGTCGCCAATTGATTTAAACGCCTTAACtaaaggttttgaaaaagtaCAAAAATTGCTAAAAGAACAAAAGGTTGCAAGCATTCACCTTCCTCGCATTGGCTATAATTCAACTAATTTCAACTGGTATGCAACAGAAAGAATCATTCGAAAGTTATTCACATCAAATGGAATCCCAACATTCATTTATTACTTCCCGAGAAGGAAACAAGGAAGTAACACCGTGAGGGATGATAATGTCAATCAAGAAGAAACCAAAACAACAGATGTGTCAGTAAAAAAAGAGAACCGAGATTTGTTAGATATATTCAGTGGAatgtcattttattttcatcaaattgACAATGAAGAAAGAAATCAATTATCAAGATATATTATTGCATATGATGGTGAAATTGTGGACTTGCTTGATGAATCTACCAGCCATGTCATTATCAATGAGGAACAACCTCAAATGTTGCCAATTACGATGCCTGCTGATTCAAAGAagataacaatagaacaattgaAGAAATTCATTAGAAATGGGACAATGACAATTTTTGCGATTCAACCATCGGCTTACGACAAAGAAAGAATTGAAGAATACATTGGTTGTTACAAAGAGGATATCAATAACCGCGCCTTCAATTATGCTGCTGGTGATTACCGTGTTACTGATTTAACTCCAGTTCAATGTATGATTGCATGCGGAGGTAAATTCAAATATGCTGCGATGCAGCATGGCATTTTCTGCATGTGTTCTGATGTATTGCCAAGCAATTCAGTAAATGAATCAAACTGCAACACACTTTGCTCTGGTTCTGTTTACTATCCAAATGAAATAACGAAGCCAAAATGTGGTGGAATTGATGCGATCAGTGTTTATTCAATTGAAGATCGAATTCTTGGTTTGAAGATCAAAAATACAGAACCTGTGCTGATTTTTGAACAATCGGAGTTTCAAGTTCTGAtaaaaaatggaagaaaatcaGTTTACAGTTTCAATTTTGGTGATGGTGATGGATCAAAACCAATGCaaacgaaaatgaaaaatatcacTCATGTTTACGATCGACCTGGAATGTATGAAGTGAATTTGAAAGCAATGAACAATGCATCTGGCGTTGTAAAGGCATCAAAATTGGTCTCAGTTGTCGATAAAGCAATAGATATTGCAATCACGTGTCCTAAAGCTTCCATTCTGGGTAAACCAATCAAATGCAATGGATCGATGTCACGTGGTTCGACAACTAAAACTGATGTTGATTTTGGTGATGGTTCAATTGAAAGTTTATCTTTAAACGTCAAGTATTCGCATGTTGGCAGAAAGATCCCTTCATTGAAGCCATTAAAAGAAACATTGAAGACATCATCAGCTACGTTCATTGTTCCTTCATCTGAATTTAGAAAGATGCAGACGATTTCGAGTTGGGAAGTTGATGCTTCACTTCATggaaatatcattttgcagATATTTCGACCAGTTTGTACATCAGAAGAGAAGTATTGTCACAAAAGTCATTCATGCATTTCAAAAAGCACAATCTGCAGTGCATTTCATGAAATCAATTGTGAAGCAAATGAAATCTATTGTTTCCATTGCGGAAAGTGTGTCACATACAACAATGACTCGATGATCCAATGTCAACAACGTCGTCATTTCAACTTCTCTACTCCACCATCTGATTATCAACTTGTTTATCAGTATATTACAAATATCCCACATAAAGGCCATCATTTTCTTAAGCTGCAATCACGTGATATGTTTAATGCTATGCCGGGTGATGTGATTGGTTGGTCATATGATGGATCTTCAACCTCAGGACAATTTGCCTTTGCTGATGTTAATGACAATGAAGATACAGCAGAGTTTCAATTTCCTTTCGTCAATGAAATTGGAAAGAAAGTCAGTAGATTGAATGGAGTAAAATTAAAAATGCAACACATTATCAGTGTGCATTTTTATGAGCAAGCATTGTTTACATTGCATCATGTTTACAACAAAACTGGAGCTTATTTGTTGACAACAAATCTTTCCAAACCAATCAATATATTCGTTGATATTCCTGTTTCAAATGTGAAATTGACTTGCCCATCTCTTACCAAGACAAATACTAAGTTTAATGTCTCCATTTCACATCATTCTGGTAGCAATGTGACATATGAGTGGTTCACTGGTGAAGGACACAAACCAATCAAATCTTTCAATCGTCAATACTTGCATATGTATCTCAAACCAGGTATTTATACATTTACTGTTTCAAGTTCAAATTCCCTGAGTCGTGTGAATTCGACATGTGAGATTCACGCACTGAATGCAATCAATGGTCTTAGATTCCGTCACATTGTCACTGCAATACCACGTGGTAACAAATCAAGAATCAGTTGGCAGGTTTCTTCTGGAACAAATGTTACATACTCTGTTGACCTTGGTGACGGCAGTTTACCCAGAATGCTGTTTGTACACGGATCTCATGACAATGAGGCTAGTTTGGAGTACAGATATAAGAATATTGGTAAATATAATGTTACAGTGACAGCAACCAGCCCAGTTGGACCAAAATTGCTGATTCAGTCAGAAGTAACTGTGGAAATTCCTTTGAAAGAGATCAAATTTTATACAATATTGCCAAATATGGCGGATCGTGTATATGTTGCCAAAGGAGAAGATTTTCATGCAACTGTCTCTCTTTCTCAAGGCTCAAATCCGATTTGCATCTTCAGATTTTCTGACAATTCCAATGACCAAATGACATCATCACTTTCAATGAAACATCGTTTTAATAAAACTGGAAACTTTGGTGCCGTAGTGACATGCTTTAACAAAGTCTCTAAACTCAATGCAACGTTAAACGCTACAATAATTGTACAAAATGTTGAACGAATAGCTAACATGCAACTGTTCGCATCACCAACGATACTTGGGAATGTCACTGAGTtttctttaacaatgaaaaGTGGGACATTGTATTTTTGTGACTGGCAATTTGGAGATGGCACTACATCGAAAACTGATTATGTGGCTAACTCATTGCCAATAAAGCATAAATTTAATGCCGTTGGTGACTATTTCGCCCAAGTATCATGTTCTAATCGTCTTGGTTCTTTTGATTCGAATATAACTCTTGCAGTTGAGATACCAATTTCAGGATTCCAACTGAATTGCTCAGCCAAGTATATCCGTATAGGTCAGCCATTTGTGATAAGAGCATTTGTGACAGCCGGATCTCGGATCAAATTTGATTTGAACTGGGGACAGAACATTAAAGATGAAACAAAATCTCTGGAGAGTAACAAAATGTTAGAGCTATCTCATACATATGATAAGATTGGTTCTTATGATGTAATTGCTGTTGCAAGCAATAAATACCACAGCATACACCGTACATGCTTAAATTCAGTTAAAGTTGAATATCCAATAGAAGGTTTGCAGATATTTACAAACAGTCCTGTTAAGTTATCTTCTGGAATCGTGGAATATAAATGGCATTCAAACCCTGGCTTCATCCCTCCAACTGATGCgatgatttcatttgattttggtGATGGTATCAAGATTGAAAAACAATCACTTCGTTTGCAGACTGAGTCAAATGTTCTTCAAACTCACAGATATGCCTCTGAAGGTTCATTCATCACTCATATAAATGTAGCAAATAATGTAAGTTCAGTGGTATTTGATTTGAAGATTGACGTGCAGAAAATGCTACCTGTGAAATTAAACATtgaacaaaaaatttcttcatcaaaCAATGCAACCTTGCCTGGATTCGGCAAGAATAATCATTTCTTCCCGTTAGAAAATCCAGCTCTAATTAGCATAACAAAACAACTCAATGACATGTGGTATTTGTATGATTTTGGAAATGGCAATCAGATCAATACATCTCAATCTGCTGTGCTCTATCGTTTTCCAAATTCAGGGACATTTAATGTTTCAGTCATGGTTCACAACAAGCTGAGACAAAGCGTACATTGGAAATTGATAAAAGTGGAAGAGAGTATAAAGAATATTATCATGAACGCAACATCTAAGATATCTCTAGTTAGTTTTAAAGAGATTTCGAAAGTTGTACAAGTCAATCAGGAACTATGCATTTCACCATCTGTTCTTATACATGGTGGTGGCTCTAATGTGCAACCattcaaagcaaagaaatcagAAAGAGTTTTCCTAACTGCAAACATCACTGCTGTATGTGAAAAGGCGAGCACTATCATTTTAACATGGGAAATAATCAAAATAGATTCAAATTCTTATCAAGAACTGTTCAATGAAACGATCAGAAAAGCAAGCATGCCTTTTGTACAACGTCCTGGAAGTTTGGATTTGAGCGTTTATGAGATTCCAAGTAAGTTCCTTCCAGTTGGGCTGAATATTGTCAAGCTAACAGTTTCTTATCAAAGTGATCAAATTGACTTGGATAGCATTAAAGGATCGAACATGGTTTGGTTAGATGTTCAAGCGACACCATTGAAAGCATTGATAAAAGGTGGTTTTAGAAGAACAGTTGCAAGCAATATCACTCTGAAACTAGATGCATCTGATTCTTATGATCCAGATTCTAGTCAAACAAGTAAAACCGGTTTGACCTTCAAATGGTATTGCAGACAGCAAAATGAGGTTTTTACGCATAATTACATGGCAAATAACATTACTGCTGGTTGTTTTGAGAATGGGCACTACAGTCTCAGTCGACCTGATAATCCAAATACATTTATAGAGgtAAATACTGGAAATCTTATTACACGACGTTCATACGTGGTTCGTTTGGTGATCAGCAAAGACACGAGAGAGAGCTATTTTGATCAAGAAATTAAAGTTCTCCCTGGAAACCCTCCAACTATGGATATTAAATGCAAGATGAATTGTCTTGATAAATCCAACTCAGCCCAGAGACTCATTCTTGAAAGTGTTTGCAAAGATTGTCTCTCCATAACAAAATTATCATTTGAGTGGTCGTTATATAAAATCACTTCATTGAAAGCGTATAAAAAAGTTGTTGGATTCTCATCGAACACGACAACTGGGGTAAATCAAGCTAATGTGGTAGTCAAAGAAAACGTTTTATCAGTTGGAGTTGATTATGCTTTGAAAATCAGTGCATGGAAATACCAAGCGAATAATGATGAAGTTGGCTCAACTGAATATCGATTTAAAGTAAATAAACCACCTTCAAATGGAGATTGCAGTATTCTGCCGAAGACAGGTTATGCTCTTGTTACGAAGTTCAAAGTCATTTGTGATAATTGGATGGATGAAGATATGCCACTTAATTATGTTATAGATGTTCTTCGAGAGGGCAATATTGCTAACATATATCGTGGCTTTGAAAGCAATGTTGAAACCGTTCTGCCAATGGGAACAGCAGATTCTAATTATGAGATGCaattatttgtaaaaatatttGATAGCTATGGTGATTATGCAAAAGTTTCTATTAAAGTCAAGGTAGAACAACCCGTGTCGATAGATCTAACTGCTGTTAGTAAAGACCTTGCTCAATTATCATCTTCTGGAAATATTCAAACATTGACACAACAAGCAGTTGCTGCTGGATCTGTTATGAATCGAGATGCAAACGCAAATGGAACAAATGCATTTTCTAAAAATGAATCTATCGCGGCTCGAACTACGATCTTGTTGGCAGTAAGTAAAATGAAAGCTTGCAGCATTGATCAAATAAGACAAGTTGGCGATGTTTATAATGAAATGACAACAAAACCAGATGAATTAACTGATGATGCCCAGGATGCTTCGTCTTCTGGAATGTCTGACATGTCAGATTGCATGTTAAAATCAAATCCACAAGATCCGTCTCTTAAACTTGCTGCTGTTACAATGTTACAAGGTTCATCCAAACTACTTCAAGCAAATATGTTGAGAACGGACAACAGTACAACCAATTTTACGACAAATAGTACGAAAGTTGCAAATGCTACATCAAAGGTTTTGGATACAGTTGATAAAGTTGGTGGTGCATTAATGCGTCAGTTGGTTGCTGGAGATAAGCCAACGGTGATTAAGCTTGCAAATATGAATTTAGAAATGTCTCAAGTTGGcgaagatgctaatgatgataaCACCGGATTTAAAATACCAAGTTTAAAATCATTGGTTGCAAATCAAACCTCTGATGGTGTCAAACAATCTGTTGGTGCTATGGTATCCTCCATGTCAAACAACCCTTATGGAACTGACTCGACATCAGCTGATATCAAATCAAGAATCATGGGTCTTTCATTAACTGATCAAAATGGAAACGCAATCAACGTTGCCGGGCAAGAACTGCAAATGTTTGTATCACGTGATGATAGTAAGAAATCATTGGCtgaaatgaataaatttgaTGACTCGGCAACTATGAGATTCCATAAATTCAACTATTCTTCACTTGaaaatgctgttgttgttgaggTTAAACCTTTGGATAAAAAACTCAAATTGAGACTTGTGTTATCTTACGGGAAAAGACCTTCATTGGTGTCATACATTTATAATCATACATTTCTGTCACACGAGGAAGGCTCTCGTGCCCTTAAGAAATTGCCTGATCCGTTTACATTTGTAATATCAAATGGACAACTAAACAAAACTGGTGAATATTTCATTGGTCTCAGCGTCTTgaataataaagatatttattCAAAATTTGGATACATTCCATCACTGAACTACAGCATGCGAATTTTCGAAACAAAATGCAAAGTTTGGAATGATGAAATGAAGATTTGGTCATCTAATGGATGCAAGGTTGGACCAAAAACAACTTACAACAGCACACAATGTATTTGCAAGATTGCTGATCAAAACACGGATGATACAAACACCAAACCGTCCTCAGGAAATGCACAAATGCAAAAGGCATCTCAgtttaatcatcatcaacatcgaaAAGTTGTAAAACGAGTTTCATTTGCTGGTGGCTTCTTTGTGGCTCCAAATCCAATTGATTTCGATAAAGCATTTGCTGGATTTGCTAATTTATCAGAAAATCCTGTTGCATTTTCAACTGTTCTTGCAATGTTTGGTGTTTACTTGATTATGCTGTTTTGGGCAAGAAGGAAGATCGAAAAGACCTTCTTAAGCCTTCCAGATAATGACGTCACAGATAAACAGTTTTATGAAGTGACAGTGTGTACAGGATTTGGAAACAGTGCAGGGACAACGTCACGTGTTTTTATCCAATTATCAGGTGAAGATGGCAGCTCTGAACCAAGAGAATTATGTGATCCAAGtaagaaaacatttcaaaagagAGCACAAGATGTTTTCCTCCTCAGCTGTGAAGATTTTCTTGGTGATTTAACATATCTGAAAATTTGGCATGATAACTCAGGTAAAAGGCCATCTTGGTACTTAAGTAAAGTTGCGATTCATGAtttaaatacaaataaaaaGTATTTATTTATAAATGAATCATGGCTGGCGGTTGAAGAAGGAGATGGTTCAATTGAGAAAGTTTTGCCAGTCGCTGGGGCTGATGAAATTGCCAGTTTTAATCATCTTTTTTACTCAACAACACAGAAGAACATAACAGATGGTCATTTATGGTTTAGTGTTTTCATCAGACCACCAAAATCAAGGTTTACAAGAGTACAAAGATTATCCTGCTGTCTAACGTTGATTTATTGTACCATGTTGACTAATGCAATGTTCTATCAAGTTGGTGGAGAATCAAATCCATCATCTACTTTAAAAATTGGACCATTTGAATTCTCTGCTGCTCAAATTGGAATTGGAGTTATGAGTAGTTTGATCATATTTCCTGTCAACTTATTAATCGTTGGTGTCTTTCGCAACGTGGGTGTTAAACCAAGTAAAGAAGAACTATCCAAAAAGAAATCTAAAAGGTTCTGGTGGCTATATGAATTATTCTTTTGCTGTGAAAGAAAAAAATCCAAATCTGAGTTCATGGACATTATCACAACAGTTCCTGATTCAGAAGCAGATTTAAAAATGAAAGCATCTTCCAAGCCGAAATATGAAGCAATTCGAGACCATCATCTGGAGAGTGCTGATATTGGTTTGAAGATAGATAATGATGATAAGATAAAACAACAAGCTAAAgaagataagaagaagaaaaagaaaacttccATGGTGGATGAAATATTTTGCATGGATTCTTCTAATTCTCACATCATTTACATCtgcatttttgttgttttatatGGATTTACATTCGGCAAAGATAAATCAGCACAATGGATCTCGTCAATGTTGATTTCATTTGTGCAAGATGTTTTCATCAGTCAACCAATGAAAATCCTCTTCTTGGGTCTTTTTGTCGCCTTGATTGTTAAGAAACcaagtgaagatgatgaagaagaaaataagaaaatgaaagatgaaatttatgTAAATGAATCATCGCATGAATCGACAACTCGAAGATCTGCTGGTATCATTAAATTTGAACCACcatctaaagagaaaatcaaagcTGCAAGAGACTTACGCTTGAAGGAAATAAAGATGTATGGCATAGTTAAAGATATATTCATCTATTTCATATTTGTGATTGCATTATGCACAGTCAGCTATACTCATCTTGATCCAAAATCATATCAATTCAAAAAAGGATTAGAAGATACTTTCATCTCTGCTTCTTATGGTGGAGATGTCGTCTTCACGGATATAACTTCACGAGAAGATTATTGGAAATGGCTCAATGACACAGCTGTGAATGCCTTATTTTCAACACATTGGTATAACAACAAACCAAATGTTCCTGGGTTTACTCAAGATTTGTACAGTAATCTATTTGGTGGAGCAAGACTTCGACAGCTACGAGTTAAAAAGGATACATGCAAAGTTCCTAACAAAATGACagttgtaacaaaagattgtAATGATTTTTATTCCTGGTCAAATGAAGATACTGATCATTACACAGTAAATTGGCAACCAGTTCAAAATACAACTCAAACGCCAACAGCCTCCTGGTCTTATTATGCATCTGATGAGCTGAACACTTACCCATTCGCAGGTAGCATGGCATTGTATGGTGGAGGTGGTTATGTTGGCGATCTTGGTAAATACCCTGCGAAATCATATAAATTaatcaaagaattaaagaaaaacaattgGTTTGATCAACGTACAAGAGCCATATTCTTTGAAGCATGTGTTTACAATGCTCAAGTGAATTTATTCGCCATCATGAATTTCGTTGCAGAATTTTTACCAACAAACGGCATCATGGTGTATCATTCTGTCAAAATCGCTCGTTTATATACTTTTGGTGGCAGCACAGAATCCTTCACAATTGCGtgtcaattttttgttttgtttttcttgcttctCTTTGTTTACAGAGAAAGCAAAAAGATTtacaaagaaggaaagaaatatttccGTGGATTTTGGAACTGGACTGAATTCACCATGATTATTTTGGTGATTATCACAATATCTGTTTTCTTCACAAGAATGTTACTTGTCAACTCAGCCGTTAAAGCAATCCATCTGAATCCTGGCAAATTCGTCAGCTTCAATAAAGTTGCAAAATGGGATGACTTATTCACCTACATGATGTCATTTTTGGTTTTGGTCGCTTGTGTCAAATCCATTCGATTACTGTCATTTAACAAAACCATTTCTCTTCTTGCTTCAACTCTTAAAGAAGTCAAAGGCAATATTTCCAAACAGTCGAATGAATACGAAATTGTCGACTTCATGATTGGACGATTCAAACGTTTCGTTGGAATACAACCAGGGAAACAACATGCTGAAAACAACGAAATGACCAAAGAGGATTTGAATGAAACGCCACCATCATTCAAAAGATTCAATAAGAGAAATCTTCACAAGAAGAAACAAGATTGCAGCGAAGAAGAAATCTTgatgaaattcaaaaaattaaatCAATCATTGAATGGTTTTTGTAAAGATGATTATGTTGAAGATGATATGCTGAATGATATAATAAGACAACGATGTCATGTGACCGCATCTGGTATGCGCAAAGAAATGAATCATGATGAATCAAAGCACGAATCAGAATATCAACAAGAATTGTATGAAGAACTGCACAAATGGACATAA

Transcript

evm.model.HiC_scaffold_32.656

Protein

evm.model.HiC_scaffold_32.656

MWLDVNTRLFSVSEAVSNNPPFASSLLRLSRLSSRINQVMEGLKSRVSHLEDSFKSINITQEALNKCGLTGINLRDYQICGINWLGSCYLNEQQNGCILGDEMGLGKTIQTLSFLAYNYQNETKRPTGPSLILAPLSVLGNWKSELERYTPCLKLLEYVGDKDQRQQFRDSMGHLANSNFDGWKTDEKSFDVMLTSYEICLKDSSFLNRFKWDALVVDEAHRLKNSKSLLYCKLTEFCICFKVLLTGTPVQNNLQEIYSLLSFICPRIFKLCEADQFVEYFQNIVSGMDSESANELTSFLKPFLLRRKKDEVMADIPTKSEVILHTKMSSVQKKLYKAILSKDLDALLDKVPQKSRLINILMELRKCCNHPYIFPGIEPEPFEMGEHLISASGKLSLLDKILKFLNLNGHRVLIFSQFTTMLDILQDYLTYKGYAYERLDGSVRGEERYLAVNNFNQSNATFVFLLSTRAGGQGLNLMTADTVIFFDNDFNPQNDLQAAARAHRIGQKRPVKVIRLLSKCTVEEIILKRALSKLKLTETVLEGGQFSNLQKSLSSANELPDILKYGLENLMNTAEGTEEDEEIESLLGGSANGEWIIEENKSRNEIVNKQKDEQTNKDNIYLYEGQDYSKFASNADRSAFDLLIAENSVAEERSSRRDKNTTVLLFQMGPKRARRELTEEEKIERKMKREENAAKRAKLIEDEKERKKEQQKLKREKLWKESNYETMNVVNDESDESDNEIVESEEDNSLQINYVVGDVLQPVQTGSQDAIVIHCVDNSGYWGRGGLFSAISSRSSNPERQYELAGKMKDLNLGDAHLIPIDDKISRQNGRDLVALIVCQSRDRNNRLSPIDLNALTKGFEKVQKLLKEQKVASIHLPRIGYNSTNFNWYATERIIRKLFTSNGIPTFIYYFPRRKQGSNTVRDDNVNQEETKTTDVSVKKENRDLLDIFSGMSFYFHQIDNEERNQLSRYIIAYDGEIVDLLDESTSHVIINEEQPQMLPITMPADSKKITIEQLKKFIRNGTMTIFAIQPSAYDKERIEEYIGCYKEDINNRAFNYAAGDYRVTDLTPVQCMIACGGKFKYAAMQHGIFCMCSDVLPSNSVNESNCNTLCSGSVYYPNEITKPKCGGIDAISVYSIEDRILGLKIKNTEPVLIFEQSEFQVLIKNGRKSVYSFNFGDGDGSKPMQTKMKNITHVYDRPGMYEVNLKAMNNASGVVKASKLVSVVDKAIDIAITCPKASILGKPIKCNGSMSRGSTTKTDVDFGDGSIESLSLNVKYSHVGRKIPSLKPLKETLKTSSATFIVPSSEFRKMQTISSWEVDASLHGNIILQIFRPVCTSEEKYCHKSHSCISKSTICSAFHEINCEANEIYCFHCGKCVTYNNDSMIQCQQRRHFNFSTPPSDYQLVYQYITNIPHKGHHFLKLQSRDMFNAMPGDVIGWSYDGSSTSGQFAFADVNDNEDTAEFQFPFVNEIGKKVSRLNGVKLKMQHIISVHFYEQALFTLHHVYNKTGAYLLTTNLSKPINIFVDIPVSNVKLTCPSLTKTNTKFNVSISHHSGSNVTYEWFTGEGHKPIKSFNRQYLHMYLKPGIYTFTVSSSNSLSRVNSTCEIHALNAINGLRFRHIVTAIPRGNKSRISWQVSSGTNVTYSVDLGDGSLPRMLFVHGSHDNEASLEYRYKNIGKYNVTVTATSPVGPKLLIQSEVTVEIPLKEIKFYTILPNMADRVYVAKGEDFHATVSLSQGSNPICIFRFSDNSNDQMTSSLSMKHRFNKTGNFGAVVTCFNKVSKLNATLNATIIVQNVERIANMQLFASPTILGNVTEFSLTMKSGTLYFCDWQFGDGTTSKTDYVANSLPIKHKFNAVGDYFAQVSCSNRLGSFDSNITLAVEIPISGFQLNCSAKYIRIGQPFVIRAFVTAGSRIKFDLNWGQNIKDETKSLESNKMLELSHTYDKIGSYDVIAVASNKYHSIHRTCLNSVKVEYPIEGLQIFTNSPVKLSSGIVEYKWHSNPGFIPPTDAMISFDFGDGIKIEKQSLRLQTESNVLQTHRYASEGSFITHINVANNVSSVVFDLKIDVQKMLPVKLNIEQKISSSNNATLPGFGKNNHFFPLENPALISITKQLNDMWYLYDFGNGNQINTSQSAVLYRFPNSGTFNVSVMVHNKLRQSVHWKLIKVEESIKNIIMNATSKISLVSFKEISKVVQVNQELCISPSVLIHGGGSNVQPFKAKKSERVFLTANITAVCEKASTIILTWEIIKIDSNSYQELFNETIRKASMPFVQRPGSLDLSVYEIPSKFLPVGLNIVKLTVSYQSDQIDLDSIKGSNMVWLDVQATPLKALIKGGFRRTVASNITLKLDASDSYDPDSSQTSKTGLTFKWYCRQQNEVFTHNYMANNITAGCFENGHYSLSRPDNPNTFIEVNTGNLITRRSYVVRLVISKDTRESYFDQEIKVLPGNPPTMDIKCKMNCLDKSNSAQRLILESVCKDCLSITKLSFEWSLYKITSLKAYKKVVGFSSNTTTGVNQANVVVKENVLSVGVDYALKISAWKYQANNDEVGSTEYRFKVNKPPSNGDCSILPKTGYALVTKFKVICDNWMDEDMPLNYVIDVLREGNIANIYRGFESNVETVLPMGTADSNYEMQLFVKIFDSYGDYAKVSIKVKVEQPVSIDLTAVSKDLAQLSSSGNIQTLTQQAVAAGSVMNRDANANGTNAFSKNESIAARTTILLAVSKMKACSIDQIRQVGDVYNEMTTKPDELTDDAQDASSSGMSDMSDCMLKSNPQDPSLKLAAVTMLQGSSKLLQANMLRTDNSTTNFTTNSTKVANATSKVLDTVDKVGGALMRQLVAGDKPTVIKLANMNLEMSQVGEDANDDNTGFKIPSLKSLVANQTSDGVKQSVGAMVSSMSNNPYGTDSTSADIKSRIMGLSLTDQNGNAINVAGQELQMFVSRDDSKKSLAEMNKFDDSATMRFHKFNYSSLENAVVVEVKPLDKKLKLRLVLSYGKRPSLVSYIYNHTFLSHEEGSRALKKLPDPFTFVISNGQLNKTGEYFIGLSVLNNKDIYSKFGYIPSLNYSMRIFETKCKVWNDEMKIWSSNGCKVGPKTTYNSTQCICKIADQNTDDTNTKPSSGNAQMQKASQFNHHQHRKVVKRVSFAGGFFVAPNPIDFDKAFAGFANLSENPVAFSTVLAMFGVYLIMLFWARRKIEKTFLSLPDNDVTDKQFYEVTVCTGFGNSAGTTSRVFIQLSGEDGSSEPRELCDPSKKTFQKRAQDVFLLSCEDFLGDLTYLKIWHDNSGKRPSWYLSKVAIHDLNTNKKYLFINESWLAVEEGDGSIEKVLPVAGADEIASFNHLFYSTTQKNITDGHLWFSVFIRPPKSRFTRVQRLSCCLTLIYCTMLTNAMFYQVGGESNPSSTLKIGPFEFSAAQIGIGVMSSLIIFPVNLLIVGVFRNVGVKPSKEELSKKKSKRFWWLYELFFCCERKKSKSEFMDIITTVPDSEADLKMKASSKPKYEAIRDHHLESADIGLKIDNDDKIKQQAKEDKKKKKKTSMVDEIFCMDSSNSHIIYICIFVVLYGFTFGKDKSAQWISSMLISFVQDVFISQPMKILFLGLFVALIVKKPSEDDEEENKKMKDEIYVNESSHESTTRRSAGIIKFEPPSKEKIKAARDLRLKEIKMYGIVKDIFIYFIFVIALCTVSYTHLDPKSYQFKKGLEDTFISASYGGDVVFTDITSREDYWKWLNDTAVNALFSTHWYNNKPNVPGFTQDLYSNLFGGARLRQLRVKKDTCKVPNKMTVVTKDCNDFYSWSNEDTDHYTVNWQPVQNTTQTPTASWSYYASDELNTYPFAGSMALYGGGGYVGDLGKYPAKSYKLIKELKKNNWFDQRTRAIFFEACVYNAQVNLFAIMNFVAEFLPTNGIMVYHSVKIARLYTFGGSTESFTIACQFFVLFFLLLFVYRESKKIYKEGKKYFRGFWNWTEFTMIILVIITISVFFTRMLLVNSAVKAIHLNPGKFVSFNKVAKWDDLFTYMMSFLVLVACVKSIRLLSFNKTISLLASTLKEVKGNISKQSNEYEIVDFMIGRFKRFVGIQPGKQHAENNEMTKEDLNETPPSFKRFNKRNLHKKKQDCSEEEILMKFKKLNQSLNGFCKDDYVEDDMLNDIIRQRCHVTASGMRKEMNHDESKHESEYQQELYEELHKWT

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZU90	Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio OX=7955 GN=chd1l PE=2 SV=1
Q3B7N1	Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1
Q86WJ1	Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000040 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01477 all species →	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF00801 all species →	PKD	PKD domain	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF02010 all species →	REJ	REJ domain	Family	Interproscan
PF01822 all species →	WSC	WSC domain	Domain	Interproscan
PF00176 all species →	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan
PF20519 all species →	Polycystin_dom	Polycystin domain	Domain	Interproscan
PF08016 all species →	PKD_channel	Polycystin cation channel	Family	Interproscan
PF16759 all species →	LIG3_BRCT	DNA ligase 3 BRCT domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035986 all species →	Homologous_superfamily	PKD domain superfamily	Interproscan
IPR002589 all species →	Domain	Macro domain	Interproscan
IPR014010 all species →	Domain	REJ domain	Interproscan
IPR001024 all species →	Domain	PLAT/LH2 domain	Interproscan
IPR000601 all species →	Domain	PKD domain	Interproscan
IPR022409 all species →	Domain	PKD/Chitinase domain	Interproscan
IPR036420 all species →	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR042060 all species →	Domain	Polycystin-1 like, PLAT/LH2 domain	Interproscan
IPR049730 all species →	Domain	SNF2/RAD5-like, C-terminal helicase domain	Interproscan
IPR002889 all species →	Domain	Carbohydrate-binding WSC	Interproscan
IPR003915 all species →	Family	Polycystic kidney disease type 2 protein	Interproscan
IPR002859 all species →	Domain	PKD/REJ-like domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR038718 all species →	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR001357 all species →	Domain	BRCT domain	Interproscan
IPR000330 all species →	Domain	SNF2, N-terminal	Interproscan
IPR046791 all species →	Domain	Polycystin domain	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR043472 all species →	Homologous_superfamily	Macro domain-like	Interproscan
IPR031053 all species →	Family	Chromodomain-helicase-DNA-binding protein 1-like	Interproscan
IPR013122 all species →	Domain	Polycystin cation channel, PKD1/PKD2	Interproscan
IPR036392 all species →	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR031916 all species →	Domain	DNA ligase 3, BRCT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47157 all species →	CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0140658 all species →	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan
GO:0003678 all species →	Molecular Function	DNA helicase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.HiC_scaffold_32.656.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.