Gene detail

Detailed information of evm.model.HiC_scaffold_32.8 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:108857...144822
NR annotation: CAH3149714.1, unnamed protein product [Porites lobata]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.HiC_scaffold_32.8

ATGGTGAAAGGGGTTCGATCCTGGACTGTTCCCTTTTCTGCTGCTGATGGAAAAATGTTTCACCATGTTAGCCGATCACTGTGCCCTGATCTTAACATGAACAGGAATAAAACAATGCCATACTTCTATATTGAGGTGTCTACAGAAAGCATCACACCTGTGAATTATACTTTGCATGCCTACCTTGTCAACCACTTTACGCTTCAGTCTGGAGAAAACAATGCAGTTAAAAACATCAGTGTCAACCCAGCAGAACCAATGTATTTCAGATATAAGTTTCAACCTAGCTATACAAGGGTTCTCGTCAAAGTGTCTTCAAATTCGAAATTATGTGGAATGGTTCTTGTTCAGAATTCGAAGTGTCCAGTCTTTGAAGAAGGAACCAATGACTTCAGTGGTTTATATGCAACTGTAACAACACAAGCAGCCATCACTGTATCGAGTAAAGTCATAAGAACAAACAGTTTTTATGTTGTGTTGCTTGTGAAGGATGCAGATCGAGATTGCTTGGTACACAAAGGGGATATCAATCCATTCAAGCGTGACGAATCATTACAAATTCACCACAACAGGAAATTTTATTCCAAAGACGGAATGAAAAAATCATACCAACCAGTTGTGCCATTTACAGAATTAACAAGGACGAAATATTTTACAATTGAGATAGAGAAGCTGCCGTCTGATGCCCAGTACGCTCCTGCAATACTTCTTCCCGTTCTTGTTTTTGGAGGCTTTTACGTTATGGCACTATTGATAATTGTCATATCTTGGTGCAATGCACAAGATGGTGGACGATCTTTCTTTGCTTATCTGATGCCATCAAAAGTAAAAGAGAACAAGGACACTGAAGACGGAGTTCGAGAAACCACGCCTCTCTTCACTTCTGACCGTGATATACACAGCTATGGAGTAACTGAGCATGATAACAGAGCTCACAGCAGAACAGAAGAGCTGATCAATGTTAATCAAGTCGATGGAATACGTGATTCAAGGCAACAACGAGTACCTTCTGATATAGGCCAAGATTTTGATTTGCTCGATGAAATTGACAAGCATAAAGATATCTACAGATTGAAGAGAAATCTATATCTTAGCGACGTGACCAAGAAGTCATACAAAAAACTCCGAAAGCGATTCAATGTTTATTATTGGAATATCATCACTATTGCCATATTCTACGCATTACCAGTCATACAACTCGTTCTTACATACCAACGTGTCGTCAACACAAGTGGTGATCAAGATATTTGCTATTACAATTTTCTATGTGCAAGACCCATGAGTGTACTGAGTGCATTTAATAACGTGTACAGCAATATTGGTTATGTGATGCTTGGAGTATTATTTCTTTTACTTGTATTGCGAAGGGATCGACTTGCAAAACAAAAGTTTGTGAAAAGCCCGGAAGAAGAAAATAAACGTGGAATACCAGGACACTATGGAATCCTTTATGCTATGGGCTTTGCTCTGATCATGGAAGGAGTTCTCAGTGCATGCTATCATGTTTGTCCGAACTATTCTAACTTTCAGTTCGGATCAGCCGTGGACGCCGCAATAGCAGCTTTATTCTGCCTTGGAACTGTGCAGTTTCAATCGACTGGAATAGGAGGTGGTGGCTTTTTGCAGTATTATGaaagagaaacaaagaaaatgcATGTGATCGATTTTAGAGAAACATTGCCTGCTAAAAACAACGAAAAAGTTTACGATGCAGATCCAAAAAAATCGAAGTCTGGTGGCTTATCTGTTGGAGTGCCTGCAGAGGTTAAAGGTCTGCGAGCAGCGTGGGACAGATTTGGAAAGCTACAGTGGAGTGAATTGATTCAGCCGTCAATTGATATTGCTAACCGAGGCTTCAAAGCGAGCAAACACCTGGTAAAATACGCAAAAATCAGAcgtgaagaaataaaaaaccctGCATTGAGGCGACTGATTGTACAAAAAGATGGTTCAACAATCTCAACCAAAACCACCATTCATAGACCAAATTATGCGAGAACTTTGGAGAAAATACGAGATAACCCAGATGAATTCTATTACGGAGAGCTGGCTGAGACTATAGTTAAAGATATAAATGATAATGGAGGGTCAATGGCTATGGACGATTTGAGGGATTACGAAGTAAAGATAAGAGAAGCAATCACAACGGAATTAGGAGATCTTACTCTGCATACTGTACCGTTACCAAGTGGGGGCCCAGTTTTGAAACATATCTTATCAATATGTAAAGCATACAATTTCAACAAGGATGATCTTGCAACAAGGGAAAAAGCTATTCTTACTTATCACCGAATTGTTGAAGCATTCAAAATAAGCTATGCATATCGACCGTATTTATGCGACCCAGATTTTCCTTCGAACGAAGAAGAATTTGAGAAGATCGCAGACGATCGGCGTTCATCGCAGACTATTCTTCTATTTAAATGCAATCATGTGAGTCTGATTACAAAAATAATTGACAGCTGTCATTGTTCTGGCCACAATATCTGCACCATGAAGGCTGAATCTCAGACAGTTACCGACGTACGGAAACACTCGCATCGAACAGTAGATAAAAGATGGAAAAGGGATCGGCGATGGTGGCAGACGATATACAGCGAAATGTTGGATCCAGAGGTTGCCAAACTGCATTATAGAAAGATTGACGATAAAAGAACATACGAAACCGATCATTACAGTAGTGTTATACAATCCCGCGAAGAAGACGGAACAACTCATGTCTCTCTAATTGCAGAGAACGGTGATGCGGTATCAGTCACGAGCAGTATCAACTTTAAATTTGGTGCACTGTTTGCATCAGGTACAACGGGCATAATCTACAATAACCAAATTGAAGATTCATTCCCAGCAAATTCTCCATGGCGCCGCTGGTCCAACGCAAACTCGCCGAGACCAAGTATCCGACCGTTATCCTCAATGGCACCTAATATTATAGTTGACAATGAAGGCGACGTAGTCATGATTTCTGGGGGATCTGGTGGACTTAGAATAACACTTAGCGTTGCATGGCTATACCAAATTACATCAGTTATGCTATCATGGCTGTTAGTGATGACCTTTCAAACTAAAGGACATCACACACCACTATACCGGACAACAAAAAACGTAAATAAAAGCCTAAGAACGGCAGAAGAGTACAATCGAGCAGCCGTAGCAACTGATCATGAAACATGTTCAAACATAGGAAAAGATATTCTTCAAAAGCGAGGATCAGCGGTTGATGCAACAATAGCTGCTTTATTCTGCCTTGGAACTGTGCAGTTTCAATCGACCGGAATTGGAGGTGGCGGCTTCTTGCAGtattatgaaagaaaaacaaagaaaatgcaTGTGTTCGATTTCAGAGAAACATTGCCTGCCAAAAACAATGAGAAAGTCTACGACCGTAACAGACGAAATACTATGAGAGgtGGTTTATCAGTTGGAGTGCCGTCAGAGGTAAAAGGCCTTTGGACAGCATGGCAAAAATTTGGAAAGCTAAACTGGAAAGAGCTGATTCAACCATCAATTGATCTCGctaaaaaaggttttaaagCTAGTAAACATCTCGCAGATCATGCTAAATCAAGGAAGAACAGGATAAAAGACCGAACTTTGAGGCAAGTATCTTTGGTCGTCTTGCGACTGATTCTACGAAAGAATGGCAAACCAATCACAACGAAAACAACAATTCATAGACCAGAATACGCAAAAACTTTGGAGAAAATACGCGATGATCCTGACAATTTCTACACAGGAGAGCTGGCTAAAACGATAGTGGATGATATAAATGATAATGGAGGATCAATGACTTTGgaagatttgaaaaattatgAAGTAAAGACAAGAGAAGCAATCACCATGGAATTAGGAGATCTTACATTGCATACCACACCACTGCCAAGCGGAGGGCCTATTTTAAAACACATCTTATCAATGTGTAAAGAATACAATTTCAACAAAGACGACCTTGCAACAACAAATAAGGCTATTCTTACTTATCACCGAATTGTCGAAGCATTCAAAACGAGCTACGCTTATCGACCATATTTATGCGATCCAGATTTCCCTTTAAACAAAGAAGAATTTCGACAGATGTACAGCGATGTTTTAAACCCAGAAGTAGCCAAATGGCATTATCAAAAGATCAACGACAAAAGAACGTACCCAACCTCTCATTACAGCAAGATTAAAAATTCACGTGAAGAAGATGGAACAACCCACGTCTCTATAATTGCCGAAAATGGTGATGCAGTGTCTGCCACAAGCACTATCAATTCCCTATTCGGCGCATTGTTTTGCTCCAGTACAACAGGTATAATATACAACAATCAAATTGGAGATACATTCCCTTTGGATTCTCCATGGCGTCAATATAACTGGTCCAACGCAAACTCACCCAGACCAAGTATCCGACCCTTATCGTCAATGGCACCTAACATTATCCTCGACAAAAAGGGGGACGTGATCATGATTTCTGGTGCGTCTGGTGGAACTAGGATTACACTCAGCGTGGCATGGgtAACAATGATGAAATTATGGTTTGGCATGGACTTGGGTAGAGCTGTCTTGATGAGCAGGCCTTATCATTCGTTGTTTCCCGAATACATAAGAAACGAAAAATTGTTTccgatgaaaaagaaaataatagaagggctgaagaagaagaaacatgACGTGAAATCATCCAGAATGTTTGCTGTAGTTCAGGCTATATACGTTGACAAAAACAATGGGAAAATATACGCAAAGTCTGATCCACGAAAGCAAGGAAAATCAGCTGGATATTAA

Transcript

evm.model.HiC_scaffold_32.8

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0DPU3	Scoloptoxin SSD14 OS=Scolopendra dehaani OX=2609776 PE=1 SV=1
P19440	Glutathione hydrolase 1 proenzyme OS=Homo sapiens OX=9606 GN=GGT1 PE=1 SV=2
P20735	Glutathione hydrolase 1 proenzyme OS=Sus scrofa OX=9823 GN=GGT1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003895 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13965 all species →	SID-1_RNA_chan	dsRNA-gated channel SID-1	Family	Interproscan
PF01019 all species →	G_glu_transpept	Gamma-glutamyltranspeptidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025958 all species →	Family	SID1 transmembrane family	Interproscan
IPR029055 all species →	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR043137 all species →	Homologous_superfamily	Gamma-glutamyltranspeptidase, small subunit	Interproscan
IPR043138 all species →	Homologous_superfamily	Gamma-glutamyltranspeptidase, large subunit, C-terminal domain	Interproscan
IPR000101 all species →	Family	Gamma-glutamyltranspeptidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11686 all species →	GAMMA GLUTAMYL TRANSPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006751 all species →	Biological Process	glutathione catabolic process	Interproscan
GO:0036374 all species →	Molecular Function	glutathione hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.HiC_scaffold_32.8.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.