Detailed information of evm.model.HiC_scaffold_32.85 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_32:1130045...1131908
NR annotation: CAH3027034.1, unnamed protein product [Porites evermanni]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2TBU8Mediator of RNA polymerase II transcription subunit 21 OS=Bos taurus OX=9913 GN=MED21 PE=2 SV=1
Q13503Mediator of RNA polymerase II transcription subunit 21 OS=Homo sapiens OX=9606 GN=MED21 PE=1 SV=1
Q4R6N3Mediator of RNA polymerase II transcription subunit 21 OS=Macaca fascicularis OX=9541 GN=MED21 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007165 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11221
all species →		Med21Subunit 21 of Mediator complexFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021384
all species →		FamilyMediator complex, subunit Med21Interproscan
IPR037212
all species →		Homologous_superfamilyMediator complex, subunit Med7/Med21-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13381
all species →		RNA POLYMERASE II HOLOENZYME COMPONENT SRB7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016592
all species →		Cellular Componentmediator complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_32.85.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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