Gene detail

Detailed information of evm.model.HiC_scaffold_33.129 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_33:1717940...1737737
NR annotation: XP_002735881.1, PREDICTED: uridine 5'-monophosphate synthase-like [Saccoglossus kowalevskii]
Species Chrysaora quinquecirrha · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.HiC_scaffold_33.129

ATGCAAAACGCAACTGCATCTGCAGCATCATCTTTGGCAGCAAGACATGCTTTCTACGGAGTTCTAATCGTATCTGGAGCCGCTACTGTTATAATGAACGCAATGTTCAGTTGTATGTTTATTGAATTTCGTAAGACACTTTTACTCCATAACAGTAATAAAATACTCTTGTCGTTGACACTTGCAGACAGTCTAGTTGGAATATCTTCAATCCTCCTTGGAGTATTATTGCTTACATTACGTAAATCAAAAATAATCTATACCCTTTTCGGTGTAATACCCTTGTTTGGTAGCATGTTTACATctattttctcacttggaatccTGACAATTGATCGCTGGATTGCAGTAAAGTTCCCACTCCGCTACAAATACATCATGCACGCGTCTAGAGTTAAGAAATTGATTATTCTCACTTGGGTATTTCCAATTCTAATTTCAGTGCAAGAATCATTAGTTCTCATCTTCGTATCAAGAAAATTCGAGCTTCAATTACGCGGCTTGCTGTTGTCAGCGTTTTTTACTGTAGGTTCGTTATTATTGTTTGTTTCAAATACAAGTTTATTTCTAGTCGTAAAGAAACATCTTGACTTTCTTAAGAATAACTCAAGCTACGTAAACCATGATGAAGCAATGACTGGGCAAGTAACCACTGAAATATTTATCAATCGACAAAGCAGGAACGAATCGTCAAGAGCAGAACAAGAAACTCTGCGCAATAAAGTTTCGTTTAAACGCGGTTTCTCAAACGAAATCAAAGCAGCGAAGACATGTATAATAATTACATTGGCCTTCATCGTTTGTTGGGCACCGTTGACAGCGTATAGGTTTAGTTATTCCGTTGGAAACAAATACTACAAGCCACGCAGAATGCTGACAAATGGTTCAGCCGTACGCTCAGCCTTCTGCCAGGTACAGGGAATGCTTGTTGCCCGAAGGTGGCTTGTTCGTACTGCTTTCAGCCATGTAATGCAAGAGGTTGCTGCTGTCCGAGCGGGGTGTTTTTCTGCTGAAATGATCTTCACAACACTTGCCTTGGTTACCATTCTGCTTATTGCAGTTTGCATGTTCTTTCACACATTCATCAGGCCAAAGAATTTTCCACCAGGTCCATTCCCATTGCCTATTATTGGAAACCTACATCTTCTGGGTAGTGCACCACACAAAATCTGCAAGCAACTGTCTCGTCAATATGGTGATGTCTTTAGCCTGTATTTTGGTGGCTACAAGGCTGTGATCATAAACAATGTTGAAGCTGCAAATGAAGCCTTGATTAAAAAGGCTACAGATTTTGCTGACAGACCTCAAATTTTTACTGGAAATGAAGTAACCAGAGGAGGGCTAGATGTTGCTGTCTCTGATTATGGCCCATACTGGAAAGTTGTTCGTAAAACAGCTCATAAAGCCTTGAAGATGTATGGTACAAACAGGAAACATTTAGAAAGCGTGATTCATGCAGCAACAAATGATCTGTTGTCCAGACTAGAAGCTAAAAATAGAATCGACTTTGATCCAAAGAAGGATTTCTCTTTTGTTCAATTTTCTCAGATAACAAGATTATGTccggcgcttgcgcataatcaTGGCATAATGaacaatttcatcccaccgtccagcttttaTCCCGCCTTTCAGCGTATGCTAAGAGAAGCAGCTAGTCTAAGAGATCCAATACTTGAGAAGTGGCTGAGAAAGCACCAAGAAACGTACGAAGAAGGGATTATTAGAGATTTTACAGATGCACTCATTTACGCTGCAAACGAAGAAATCAAAGAGGAAAAATCAAGCCAACGCTATCTAAAAGAGGATAACATAATCATGATAATGGCTGATGTTTTCAATGCTGCGATTGAAACAACGGCAACTACAATGCGTTGGTTCATTGCCTACTCTGTGATTTGGCCTGAGACACAGAAGAAAATTCACGAAGAGCTTGATAAGGTGATTGGCAGATCACGTGTGCCTCAAATGACTGATCGTATCTCTCTTCCTTATTTTGAGGCGGCTATCAACGAAACAGCACGGCTGGCATCCGTTGGACCATTTGGCGTACCACATCAAACCACATGTAACACAAGTGTGGCTGGATATAGAATCCCAAAGAAAACACACGTTTTCTTTAATCTTTATGCAATACATCACGATGAACGACATTGGAAAGATCCAGAAACCTTCCTGCCCAGAAAGATGAGCGACCGCAATACAGGTTGTGCACGCAGAGAGGATTTCCTAATTCAGATGtccgccattttccagaaaaatgtcacgccgacccaAGCCTCtctaaaaatgtctttgaatcAAGAGGACAAGAGAGAGCACGTGCACGAAAAAAGAAGCCTGAAGGAGAGAGGAAGAATGGCGGGACAAAAAAGCAGAGAAGAGATCATAAAAATTTTATACGATATAGAAGCTGTTAAGTTTGGTGAATTCAAGTTGAAAACAGGTCTTCTTTCACCAATTTACTTTGATCTTCGTGTTCTCATCTCTTTTCCCAATCTGATGCGCCAGGTGAGTGAGTTGTTGTGGCAAACTGCAAATTTAGGCCATGCTGAATATTCGTATATTTGCGGAGTACCATACACAGCTCTTCCTCTTGCAACATGTATCTCAGCTGCTCATGATATTCCGATgcttatcaaaaggaaagaagTAAAAGATTATGGAACAAAGAAAATGATAGAAGGTAAATATGAAGAAGGTAAAAAGTGTTTGATTATCGAAGACGTTGTTACAAGTGGGGGCAGCGTCCTGGAAACAGCCACAAGTTTTCAACAAGTGAATGTGAAAGTTACTGATGCAGTGGTGCTTTTGAACAGGGAGCAAGGGGGACTTGAACATCTTCAATCCAATGGTATTAAGCTGCATTGTGTTTTTACAGTATCAGAGGTATTAAATGTACTACAAAGTTTAGGATGCATCAATGCGAATGCTGTTTTAGCTGTGCAAAAATTTATAAGATCTAACGTATTCTCACCAATTCAAGAGTCAAGTGAACAGAACAAAGTCCCAGCTGCTACAACGAAAAGGCTAACATATTCTGAGAGAGAGCAAATAGCAAAAAATCCAATCAGTCAAAGGTTATGGAAAATCATGGCCTCCAAGGAAACTAACCTGGCATTTTCAGCTGATGTCACTTGCTGtgaaaaactgcttgaaatggcaGATAAAGTTGGACCCTTCATTTGCATTCTAAAAATCCATGCTGATATCCTGACAAATTTCAATGATGAATTTGTGATCAAGCTTTTGGCTTTGGCAAAAAAGCacaatttcttgatttttgaagaTAGAAAGTATGCTGACATTGGCAATACAGTGAAGCATCAATTTTCCAGTGGGATTTATAAGACACTGATTTGGGCAGATATTGTAACTGTTCATCCTGTTCCAGGAGATGGGGTAGTAGAAGGTTTGAAGGAAGCAGCTCGAGGGCATGAAAGAGGTTGTTTTCTTGTTGCTCAGATGAGCTCAAAGGGAAATTTAGCAACTGGAAGTTATACAGAAGAAAGTGTTAATATAGCAAAGAGGCATAAAGATTTTGTCATTGGTTTTATTTGTCAATCATCTGTTAGTGATGATCCAGAATTTGTGAAGCTTACCCCTGGGGTTCATTTGCAGAAAACAGGTGACACCCTGGGTCAGAATTATAATACACCAGAAGATGTGATATGCAATAAAGGAAGTGATGTCATCATTGTTGGAAGGGGAATCTACCAATCAGATGATCCTGTTTCAGCTGCAAAGGAGTACCAAAAGCAAGATAATATAGCGTGGCAGCTTTTTCTCGATGTCGTCAGGTTTTATGGGGCTGATAACGTCTGTGGGTTAAGATACGATGCTAACAATAAAGCCACAATGCTTTTCTGGATTTTTAGCCACTGGTTGCTGCATGGTAAATTCATTAGATTCATGACAGAGGATAACGACGGTTGGTATGTACTTTCATTCGACGGCAAACTGCTTCGCACTGGGCTAACACCAACAAGTGGAGATGTTGACATGTTTGGGACAGAAAACGGCCTCTTCTATCAGAACAGAAGGAACGTCAAAGAAGGAGAAGACTGGAGAAAATCCAGATATTCGATTGTGATATCAAGGACAAGATGCGACATTGCAGAACAGGACGAATTTATTCAACGTGCACTTGCTCTGGTGAAGAGGTTCTGCATTGCAGCTAGATATTTGATGGAACTCCCTACTCCTACTTCACTTTCTTCTCGTAATCAGATAACTctccaaaatttcatctttgaacTAAAATATCCCACCGAGTTGAGTGCCCTGGATAAAGCAAATCCATTGTGCATCAATCAGCATACCGATGAATGGTTCGAGCTGCGTTCACAAGCACCAATTACAGGTAGCACACTGTATAATGGACTCGGCATATCATCATTGAAGAAGCGAaaggaattttttaaagaaaaggagCTCCGAAAGACCAATCAAGAAACTGAGATTTCACCTGAACTTGCTCAAAGATTTGCATGGGGGACTGAACGAGAAAAGCATGCCGTAGCAACATTTGTTGCTTATGGTATACCTCTACTTTTCCCGGAACTGCATTTCATTGAAATAGGAGCATCTTTCATTCAAGatcaaaatggtaaaaaattaattgaagtcTCTGCAGATGGTATTTTAGGAAATATTGCCCCTAATGAAGGTATAGCTTCTGTTAAGCACAAGGTCGAAATAAAATGCCCAATGACACCAGGACCTGAAGCATTTAACCTTCCGGTTTATTATGGATTACCAAAATACTACGCCTTGCAAGTGCTTGCAGAAATGGCTGCTCCACCAACAACAGACAGCTGCATTTTCGTTTGCTTTTCGGAAAAACTGGTAAAAGAAGAGGTGTTCGAATTGTTCAACCAAGACGCCCTAAAGGCTCCGAAGTCGAGAAATGAAAGAGTAAGGTCACAGATTCCCAAGAATATAGCGAAATTTCTTGATGAACATGTCACCATTCTGGCAGAGAAGAGTGTGTTCACGAAAGTTAAAAAAATGAGCAAAGCGGAGATCATATCGAAATTAAAATCGTTGAACAGCGGCGATGAGAGCAGAGAGGTGATGGTAACGGGAGAAAGGTGCCTCACAGTGTCAGGCATGGTGATAGCAACGACAGCCAGACAACATTTGAGAAAGGCAACAAAGCAGAATACAAAGCCTGAAGATATTGATCAGTTCGAGGAGGACGAATCACAAGATAATGTTTCTGATGGACGTTATGTTGAAGATAAGAATAGTGAAGATATGAATATGGAAGTTCAGGAAATTGATGATGGCGAAGAAAAGGTTATagagcaagaaaagaaaaaaagaaaaatgcaagAAGCGATGCCAAAAGGTTCAAAGGTAGCTAAAACTCGAAAAACGCCTCTTAACGTTGCCATGGCTGTCGACTTGATAGACAAGCAAGACATAGAATTTGCTAAGACAACATTTTGTGAGGCTGTAGAATCTTCAATGCGGGACCTTGGTTTTCAAGAGGAGGCCGATTTTTGTCAACTAGCAAGGAATTGGTATCGTGCCGATGATGAACCAGGAATCTCAGCCAAGCTACGACTTCAATATCGAATCGCAATGAAGAACTTTCTATTAAGAGAtgttaattttggaaaatttcctcCGTTCGGTAGCTACTTATATGGTTTGGTTAGCAGTTACAACCAACGCTCGATTACTACGCTGAACGTCGAGAATTTCTTCAGCACTCTACAAAAGCTCGATGCAGCAACTGGAACTGAACATTTAAGAGCGAAAGATGCACAAAGAGCAATGGGGTCTGCATATGGACATAAGTAA

Transcript

evm.model.HiC_scaffold_33.129

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R514	Uridine 5'-monophosphate synthase OS=Pongo abelii OX=9601 GN=UMPS PE=2 SV=1
P11172	Uridine 5'-monophosphate synthase OS=Homo sapiens OX=9606 GN=UMPS PE=1 SV=1
Q42942	Uridine 5'-monophosphate synthase (Fragment) OS=Nicotiana tabacum OX=4097 GN=PYR5-6 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007636 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00156 all species →	Pribosyltran	Phosphoribosyl transferase domain	Domain	Interproscan
PF00215 all species →	OMPdecase	Orotidine 5'-phosphate decarboxylase / HUMPS family	Domain	Interproscan
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan
PF09588 all species →	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014732 all species →	Family	Orotidine 5'-phosphate decarboxylase	Interproscan
IPR023031 all species →	Family	Orotate phosphoribosyltransferase	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR029057 all species →	Homologous_superfamily	Phosphoribosyltransferase-like	Interproscan
IPR011604 all species →	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR000836 all species →	Domain	Phosphoribosyltransferase domain	Interproscan
IPR002401 all species →	Family	Cytochrome P450, E-class, group I	Interproscan
IPR001754 all species →	Domain	Orotidine 5'-phosphate decarboxylase domain	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR018089 all species →	Active_site	Orotidine 5'-phosphate decarboxylase, active site	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR004467 all species →	Domain	Orotate phosphoribosyl transferase domain	Interproscan
IPR019080 all species →	Domain	YqaJ viral recombinase	Interproscan
IPR011060 all species →	Homologous_superfamily	Ribulose-phosphate binding barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19278 all species →	OROTATE PHOSPHORIBOSYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004590 all species →	Molecular Function	orotidine-5'-phosphate decarboxylase activity	Interproscan
GO:0044205 all species →	Biological Process	'de novo' UMP biosynthetic process	Interproscan
GO:0004588 all species →	Molecular Function	orotate phosphoribosyltransferase activity	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0006222 all species →	Biological Process	UMP biosynthetic process	Interproscan
GO:0019856 all species →	Biological Process	pyrimidine nucleobase biosynthetic process	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.HiC_scaffold_33.129.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.