Detailed information of evm.model.HiC_scaffold_338.2 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_338:4668...8146
NR annotation: CAG4636544.1, EOG090X0ECZ [Eubosmina coregoni]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZLX5Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1
Q5R580Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=ZRANB2 PE=2 SV=1
Q19QU3Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005420 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.HiC_scaffold_338.2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR001876
all species →		DomainZinc finger, RanBP2-typeInterproscan
IPR036443
all species →		Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12999
all species →		ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001530
all species →		Molecular Functionlipopolysaccharide bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_338.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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