Detailed information of evm.model.HiC_scaffold_34.32 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_34:370664...381286
NR annotation: KXJ19584.1, WD repeat-containing protein 43 [Exaiptasia diaphana]
Species abbreviation CQUIN · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q04177U3 small nucleolar RNA-associated protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006030 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04003
all species →		Utp12Dip2/Utp12 FamilyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052414
all species →		FamilyU3 small nucleolar RNA-associated WD repeat-containing proteinInterproscan
IPR007148
all species →		DomainSmall-subunit processome, Utp12Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44267
all species →		WD REPEAT-CONTAINING PROTEIN 43Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_34.32.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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