Detailed information of evm.model.HiC_scaffold_34.6 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_34:29995...33491
NR annotation: XP_004207839.1, 40S ribosomal protein S6 [Hydra vulgaris]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q90YR8Small ribosomal subunit protein eS6 OS=Ictalurus punctatus OX=7998 GN=rps6 PE=2 SV=1
P62753Small ribosomal subunit protein eS6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1
Q4R4K6Small ribosomal subunit protein eS6 OS=Macaca fascicularis OX=9541 GN=RPS6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007801 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01092
all species →		Ribosomal_S6eRibosomal protein S6eFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014401
all species →		FamilySmall ribosomal subunit protein eS6-likeInterproscan
IPR018282
all species →		Conserved_siteSmall ribosomal subunit protein eS6, conserved siteInterproscan
IPR001377
all species →		FamilySmall ribosomal subunit protein eS6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11502
all species →		40S RIBOSOMAL PROTEIN S6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02991RP-S6e, RPS6; small subunit ribosomal protein S6e-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP