Detailed information of evm.model.HiC_scaffold_342.7 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_342:129082...133823
NR annotation: XP_028397942.1, RING finger protein 141-like isoform X1 [Dendronephthya gigantea]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99MB7RING finger protein 141 OS=Mus musculus OX=10090 GN=Rnf141 PE=1 SV=2
Q8WVD5RING finger protein 141 OS=Homo sapiens OX=9606 GN=RNF141 PE=1 SV=1
Q5R7K8RING finger protein 141 OS=Pongo abelii OX=9601 GN=RNF141 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007514 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR047126
all species →		FamilyRING finger protein 141-likeInterproscan
IPR043400
all species →		DomainRNF141, RING finger, HC subclassInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12109
all species →		RING FINGER PROTEIN 141-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0051865
all species →		Biological Processprotein autoubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_342.7.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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