Detailed information of evm.model.HiC_scaffold_355.22 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_355:145948...154913
NR annotation: XP_020615755.1, LOW QUALITY PROTEIN: dynein heavy chain 6, axonemal-like [Orbicella faveolata]
Species Chrysaora quinquecirrha · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9C0G6Dynein axonemal heavy chain 6 OS=Homo sapiens OX=9606 GN=DNAH6 PE=1 SV=3
Q8TD57Dynein axonemal heavy chain 3 OS=Homo sapiens OX=9606 GN=DNAH3 PE=1 SV=1
Q8BW94Dynein axonemal heavy chain 3 OS=Mus musculus OX=10090 GN=Dnah3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000142 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18198
all species →		AAA_lid_11Dynein heavy chain AAA lid domainDomainInterproscan
PF18199
all species →		Dynein_CDynein heavy chain C-terminal domainDomainInterproscan
PF21524
all species →		SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan
PF03028
all species →		Dynein_heavyDynein heavy chain region D6 P-loop domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041658
all species →		DomainDynein heavy chain AAA lid domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041228
all species →		DomainDynein heavy chain, C-terminal domainInterproscan
IPR048589
all species →		DomainSAM domain-containing protein 1-like, WH domainInterproscan
IPR043160
all species →		Homologous_superfamilyDynein heavy chain, C-terminal domain, barrel regionInterproscan
IPR042219
all species →		Homologous_superfamilyDynein heavy chain AAA lid domain superfamilyInterproscan
IPR004273
all species →		DomainDynein heavy chain region D6 P-loop domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22878
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0007018
all species →		Biological Processmicrotubule-based movementInterproscan
GO:0008569
all species →		Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286
all species →		Cellular Componentdynein complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.HiC_scaffold_355.22.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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