Gene detail

Detailed information of evm.model.ptg000003l.76 in Aurelia coerulea

Genomic Location: chr1:1863933...1868266
NR annotation: XP_044176167.1, 39S ribosomal protein L22, mitochondrial-like isoform X1 [Acropora millepora]
Species Aurelia coerulea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VXB5	Large ribosomal subunit protein uL22m OS=Drosophila melanogaster OX=7227 GN=mRpL22 PE=2 SV=2
Q29IK4	Large ribosomal subunit protein uL22m OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=mRpL22 PE=3 SV=2
B8GV53	Large ribosomal subunit protein uL22 OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=rplV PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007978 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00237 all species →	Ribosomal_L22	Ribosomal protein L22p/L17e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036394 all species →	Homologous_superfamily	Ribosomal protein uL22 superfamily	Interproscan
IPR001063 all species →	Family	Large ribosomal subunit protein uL22	Interproscan
IPR047867 all species →	Family	Large ribosomal subunit protein uL22, bacterial/organelle-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13501 all species →	CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02890	RP-L22, MRPL22, rplV; large subunit ribosomal protein L22	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.